Difference between revisions of "WBConfCall 2013.11.21-Agenda and Minutes"
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== Outstanding Help Desk issues also known as house keeping == | == Outstanding Help Desk issues also known as house keeping == | ||
− | Wen: These are help desk issues that are still open | + | Wen: These are help desk issues that are still open. |
+ | |||
+ | The following are related to GFF3 implementation - no need to discuss individually on the call. GFF3 implementations will be ready in WS240. | ||
− | |||
* [[https://github.com/WormBase/website/issues/2019 2019]] - gff3 implementation no discussion necessary until gff3 code is ready? | * [[https://github.com/WormBase/website/issues/2019 2019]] - gff3 implementation no discussion necessary until gff3 code is ready? | ||
* [[https://github.com/WormBase/website/issues/2026 2026]] - gff3 implementation no discussion necessary until gff3 code is ready? | * [[https://github.com/WormBase/website/issues/2026 2026]] - gff3 implementation no discussion necessary until gff3 code is ready? | ||
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Other issues: | Other issues: | ||
+ | |||
+ | Chris will reply to questions related to WormMine. Wen will make sure that every user gets response from us. | ||
* [[https://github.com/WormBase/website/issues/1939 1939]] Blast tool changes | * [[https://github.com/WormBase/website/issues/1939 1939]] Blast tool changes |
Revision as of 21:38, 21 November 2013
Contents
Agenda
Please add your agenda items here.
WS241 models
WS241 models summary WS241 Models.wrm --- all approved by curators.
Curators checked their model proposals in this file: WS241 pre-WS241 tagged models [pre-WS241]
1) ?Person class
2) ?Interaction and ?Feature models
3) ?Movie and Expression_pattern changes
3.1) Expr_pattern
3.2) Movie
4) ?Protein Class
5) Extras from the deadline call
5.1) ?Expression_cluster and ?Analysis class - Wen
5.2) ?DO_term - Ranjana
Outstanding Help Desk issues also known as house keeping
Wen: These are help desk issues that are still open.
The following are related to GFF3 implementation - no need to discuss individually on the call. GFF3 implementations will be ready in WS240.
- [2019] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2026] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2028] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2029] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2030] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2031] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2032] - gff3 implementation no discussion necessary until gff3 code is ready?
- [910] - gff3 implementation no discussion necessary until gff3 code is ready?
Other issues:
Chris will reply to questions related to WormMine. Wen will make sure that every user gets response from us.
- [1939] Blast tool changes
- [1549] Extra table in Associations widget-Anatomy page
- [1890] original problem fixed but TreeFam image still looks messed up
- [2022] Can we scale TreeFam Image?
- [1999] n1774 listed as sequenced but location is not known.
- [2009] Look for wormmine model browser
- [2012] Discussion about curation of pers. Comm [Mary Ann: The pers. comm part of this ticket is resolved, but attaching evidence to manual annotation from external curation groups is still under discussion] - NOT HELPDESK
- [2015] External URL, karen and Abi are working on this
- [2016] External URL, karen is working on this - NOT HELPDESK
- [2017] slt-1 gene page is still suggesting that the gene hasn't been physically mapped, but clearly has a sequence:
- [2018] Molecular Details widget not displaying properly on any variation page on Staging site - NOT HELPDESK
- [2021] WikiPathway images on Topic pages - NOT HELPDESK
- [2027] 'Associations' widget consistently timing out on the 'nucleus' GO Term page on Staging - NOT HELPDESK
- [2034] WormMine Qury builder is looking for RNAi data although we have none
- [2037] asked for a bunch of tracks got back Bio::GRahics error......
- [2041] Resource Identification in the Literature project
- [2043] vab-3 doesnt have a location on the gene page. Please fix. -- closed
- [2044] hlh-2 does not have a gene structure either -- closed
There are lots of other issues in the system not listed here, but will be worked on when time allows.