Difference between revisions of "WBConfCall 2013.11.21-Agenda and Minutes"
From WormBaseWiki
Jump to navigationJump to searchLine 32: | Line 32: | ||
Wen: These are help desk issues that are still open, please reply or close them if the issue is resolved. | Wen: These are help desk issues that are still open, please reply or close them if the issue is resolved. | ||
− | The following are related to GFF3 | + | The following are related to GFF3 implementation - no need to discuss individually on the call. |
* [[https://github.com/WormBase/website/issues/2019 2019]] - gff3 implementation no discussion necessary until gff3 code is ready? | * [[https://github.com/WormBase/website/issues/2019 2019]] - gff3 implementation no discussion necessary until gff3 code is ready? | ||
* [[https://github.com/WormBase/website/issues/2026 2026]] - gff3 implementation no discussion necessary until gff3 code is ready? | * [[https://github.com/WormBase/website/issues/2026 2026]] - gff3 implementation no discussion necessary until gff3 code is ready? | ||
Line 48: | Line 48: | ||
* [[https://github.com/WormBase/website/issues/1549 1549]] Extra table in Associations widget-Anatomy page | * [[https://github.com/WormBase/website/issues/1549 1549]] Extra table in Associations widget-Anatomy page | ||
* [[https://github.com/WormBase/website/issues/1890 1890]] original problem fixed but TreeFam image still looks messed up | * [[https://github.com/WormBase/website/issues/1890 1890]] original problem fixed but TreeFam image still looks messed up | ||
+ | * [[https://github.com/WormBase/website/issues/2022 2022]] Can we scale TreeFam Image? | ||
* [[https://github.com/WormBase/website/issues/1999 1999]] n1774 listed as sequenced but location is not known. | * [[https://github.com/WormBase/website/issues/1999 1999]] n1774 listed as sequenced but location is not known. | ||
* [[https://github.com/WormBase/website/issues/2009 2009]] Look for wormmine model browser | * [[https://github.com/WormBase/website/issues/2009 2009]] Look for wormmine model browser | ||
Line 57: | Line 58: | ||
* [[https://github.com/WormBase/website/issues/2018 2018]] Molecular Details widget not displaying properly on any variation page on Staging site | * [[https://github.com/WormBase/website/issues/2018 2018]] Molecular Details widget not displaying properly on any variation page on Staging site | ||
* [[https://github.com/WormBase/website/issues/2021 2021]] WikiPathway images on Topic pages | * [[https://github.com/WormBase/website/issues/2021 2021]] WikiPathway images on Topic pages | ||
− | |||
* [[https://github.com/WormBase/website/issues/2027 2027]] 'Associations' widget consistently timing out on the 'nucleus' GO Term page on Staging | * [[https://github.com/WormBase/website/issues/2027 2027]] 'Associations' widget consistently timing out on the 'nucleus' GO Term page on Staging | ||
* [[https://github.com/WormBase/website/issues/2034 2034]] WormMine Qury builder is looking for RNAi data although we have none | * [[https://github.com/WormBase/website/issues/2034 2034]] WormMine Qury builder is looking for RNAi data although we have none | ||
Line 64: | Line 64: | ||
* [[https://github.com/WormBase/website/issues/2043 2043]] vab-3 doesnt have a location on the gene page. Please fix. | * [[https://github.com/WormBase/website/issues/2043 2043]] vab-3 doesnt have a location on the gene page. Please fix. | ||
* [[https://github.com/WormBase/website/issues/2044 2044]] hlh-2 does not have a gene structure either | * [[https://github.com/WormBase/website/issues/2044 2044]] hlh-2 does not have a gene structure either | ||
− | * [[https://github.com/WormBase/website/issues/ | + | * [[https://github.com/WormBase/website/issues/2066 2066]] : Expected URL: http://www.wo... Submitted From: C30C11.4 (/species/c_elegans/protein/WP:CE00103) |
== SAB == | == SAB == |
Revision as of 16:15, 21 November 2013
Agenda
Please add your agenda items here.
WS241 models
WS241 models summary WS241 Models.wrm
Curators to check their model proposals in this file: WS241 pre-WS241 tagged models [pre-WS241]
1) ?Person class
2) ?Interaction and ?Feature models
3) ?Movie and Expression_pattern changes 3.1) Expr_pattern 3.2) Movie
4) ?Protein Class
5) Extras from the deadline call
5.1) ?Expression_cluster and ?Analysis class - Wen
5.2) ?DO_term - Ranjana
Outstanding Help Desk issues
Wen: These are help desk issues that are still open, please reply or close them if the issue is resolved.
The following are related to GFF3 implementation - no need to discuss individually on the call.
- [2019] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2026] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2028] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2029] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2030] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2031] - gff3 implementation no discussion necessary until gff3 code is ready?
- [2032] - gff3 implementation no discussion necessary until gff3 code is ready?
- [910] - gff3 implementation no discussion necessary until gff3 code is ready?
Other issues:
- [1939] Blast tool changes
- [1549] Extra table in Associations widget-Anatomy page
- [1890] original problem fixed but TreeFam image still looks messed up
- [2022] Can we scale TreeFam Image?
- [1999] n1774 listed as sequenced but location is not known.
- [2009] Look for wormmine model browser
- [2010] todd is working on it
- [2012] Discussion about curation of pers. Comm [Mary Ann: The pers. comm part of this ticket is resolved, but attaching evidence to manual annotation from external curation groups is still under discussion]
- [2015] External URL, karen and Abi are working on this
- [2016] External URL, karen is working on this
- [2017] slt-1 gene page is still suggesting that the gene hasn't been physically mapped, but clearly has a sequence:
- [2018] Molecular Details widget not displaying properly on any variation page on Staging site
- [2021] WikiPathway images on Topic pages
- [2027] 'Associations' widget consistently timing out on the 'nucleus' GO Term page on Staging
- [2034] WormMine Qury builder is looking for RNAi data although we have none
- [2037] asked for a bunch of tracks got back Bio::GRahics error......
- [2041] Resource Identification in the Literature project
- [2043] vab-3 doesnt have a location on the gene page. Please fix.
- [2044] hlh-2 does not have a gene structure either
- [2066] : Expected URL: http://www.wo... Submitted From: C30C11.4 (/species/c_elegans/protein/WP:CE00103)