WBConfCall 2013.02.07-Agenda and Minutes

From WormBaseWiki
Jump to navigationJump to search


  • 8 models proposals for WS237 inclusion.
    • 2 provisional
      • History_gene connections (multiple classes) - Chris
        • Needs significant testing, Paul will liaise with Chris.
      • Feature_data - Gary
        • Mapping to a condition rather than via a method.
        • Needs testing as may have implications for acedb.
    • 6 scheduled for inclusion.
      • Accession class retirement continues
        • Oligo_set mapping in homol_data
        • Transgene - Karen
      • Transcript - Paul
        • Add biotype lincRNA.
      • Oligo_set & Microarray_result - wen/kev
        • Addition of ?Species
      • ?YH & ?Gene_regulation retirement - Chris
        • Complicated change as needs interaction adding in lots of classes.

Will update when back in office.

David Miller cell specific expression data-tiling arrays

From Daniela: WS235 contains the links to WormViz in the anatomy page under the External links widget. David writes: "Although the link is certainly useful in this location its really buried and will not be noticed by most users. why not include a link to wormviz on the expression page for each gene?"

Have the tiling array data been curated already? if so we can point him to SPELL.

Request from Caltech to expand release notes

Caltech has been making a list of datatypes/objects that we would like numbers for, from each build, to be included in release notes. Is this something that Hinxton could do?

See http://wiki.wormbase.org/index.php/Release_note_requests

From discussions:

  • Release notes should be aimed at user community, tag names and some numbers may not be interesting for them.
  • We could generate a separate list for internal use, with all the statistics that curators want