Difference between revisions of "User:Mh6"
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| − | Michael | + | === summary === |
| + | Name: Michael Paulini | ||
| − | + | I am working in the wormbase group at the Wellcome Trust Genome campus in Cambridge,UK and responsible for: | |
| − | + | *refactoring / rewriting pipeline scripts | |
| + | *our worm EnsEMBL pipeline/database | ||
| − | + | === interests === | |
| − | + | ==== Biology related ==== | |
| − | |||
| − | |||
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| − | + | *cDNAs / ESTs from my previous work at the German cDNA consortium | |
| + | *transcriptome analysis of Pongo pygmaeus (Orangutan) | ||
| + | *SNP association studies for complex diseaes (asthma) | ||
| + | *lab automatition (Beckmann/Tecan) | ||
| + | *de-novo design of antimicrobial peptides | ||
| − | ==== | + | ==== IT related ==== |
| − | * | + | *postgeSQL (preferred) , mySQL / Oracle / ObjectStore |
| − | * | + | *Ruby / Perl / Python |
| − | * | + | *Java / C++ / C |
| − | * | + | *SML / OCAML (touched it during some Informatics courses) |
| − | * | + | *FreeBSD / GNU-Darwin / Linux on PowerPC / BioRuby / Scientific Ruby / OpenSputnik |
| − | === | + | === other things === |
| − | + | proposal for GFF3 alignment format: [[GFF3specProposal|GFF3specProposal]] | |
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Latest revision as of 13:40, 15 August 2013
summary
Name: Michael Paulini
I am working in the wormbase group at the Wellcome Trust Genome campus in Cambridge,UK and responsible for:
- refactoring / rewriting pipeline scripts
- our worm EnsEMBL pipeline/database
interests
- cDNAs / ESTs from my previous work at the German cDNA consortium
- transcriptome analysis of Pongo pygmaeus (Orangutan)
- SNP association studies for complex diseaes (asthma)
- lab automatition (Beckmann/Tecan)
- de-novo design of antimicrobial peptides
- postgeSQL (preferred) , mySQL / Oracle / ObjectStore
- Ruby / Perl / Python
- Java / C++ / C
- SML / OCAML (touched it during some Informatics courses)
- FreeBSD / GNU-Darwin / Linux on PowerPC / BioRuby / Scientific Ruby / OpenSputnik
other things
proposal for GFF3 alignment format: GFF3specProposal
