Difference between revisions of "User:Mh6"
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I am working in the wormbase group at the Sanger Institute and at the moment responsible for: | I am working in the wormbase group at the Sanger Institute and at the moment responsible for: | ||
| − | * | + | *looking after wiki edits |
*our local wormbook mirror at http://wormbook.sanger.ac.uk | *our local wormbook mirror at http://wormbook.sanger.ac.uk | ||
*our local wormbase mirror at http://wormbase.sanger.ac.uk | *our local wormbase mirror at http://wormbase.sanger.ac.uk | ||
Revision as of 10:50, 18 September 2009
Michael Han from the Sanger Institute in Cambridge, UK.
Responsible for orthology predictions and the Sanger mirror.
short version
I am working in the wormbase group at the Sanger Institute and at the moment responsible for:
- looking after wiki edits
- our local wormbook mirror at http://wormbook.sanger.ac.uk
- our local wormbase mirror at http://wormbase.sanger.ac.uk
- refactoring / rewriting pipeline scripts
- our local Perl installation for the pipeline
- our worm EnsEMBL databases (COMPARA and CORE)
interests
- cDNAs / ESTs from my previous work at the German cDNA consortium
- transcriptome analysis of Pongo pygmaeus (Orangutan)
- SNP association studies for complex diseaes (like asthma)
- lab automatition (Beckmann/Tecan)
- antimicrobial peptides
- postgeSQL (preferred) , mySQL / Oracle / ObjectStore (if it has to be)
- Ruby / Perl / Python (mainly)
- Java / C++ / C
- SML / OCAML (touched it during some Informatics courses)
- FreeBSD / GNU-Darwin / Linux on Power / BioRuby / Scientific Ruby / OpenSputnik
other things
proposal for GFF3 alignment format: GFF3specProposal
