Difference between revisions of "Updating go.ace file"

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WormBase ?GO_term Model:
 
WormBase ?GO_term Model:
  
     ?GO_term  Name ?Text
+
     ?GO_term  Name   ?Text
               Definition ?Text
+
               Definition ?Text
               Term ?Text
+
               Term   ?Text
        Type UNIQUE Biological_process
+
              Type UNIQUE Biological_process
        Cellular_component
+
  Cellular_component
        Molecular_function
+
  Molecular_function
 
        Child Instance ?GO_term XREF Instance_of
 
        Child Instance ?GO_term XREF Instance_of
 
        Component ?GO_term XREF Component_of
 
        Component ?GO_term XREF Component_of

Revision as of 18:34, 12 June 2013

Updating the go.ace File - Script Specifications

  • Output file: go.ace

WormBase ?GO_term Model:

    ?GO_term  Name	  ?Text
              Definition ?Text
              Term	  ?Text
              Type UNIQUE Biological_process

Cellular_component Molecular_function Child Instance ?GO_term XREF Instance_of Component ?GO_term XREF Component_of Parent Instance_of ?GO_term XREF Instance Component_of ?GO_term XREF Component Attributes_of Cell ?Cell XREF GO_term Motif ?Motif XREF GO_term Gene ?Gene XREF GO_term CDS ?CDS XREF GO_term Sequence ?Sequence XREF GO_term Transcript ?Transcript XREF GO_term Pseudogene ?Pseudogene XREF GO_term Phenotype ?Phenotype XREF GO_term Index Ancestor ?GO_term XREF Descendent Descendent ?GO_term XREF Ancestor Anatomy_term ?Anatomy_term XREF GO_term Homology_group ?Homology_group XREF GO_term Expr_pattern ?Expr_pattern XREF GO_term Picture ?Picture XREF Cellular_component Version UNIQUE Text UNIQUE Text