Difference between revisions of "Updating go.ace file"

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Line 7: Line 7:
 
WormBase ?GO_term Model:
 
WormBase ?GO_term Model:
  
     ?GO_term Name ?Text
+
     ?GO_term Name ?Text
                Definition ?Text
+
              Definition ?Text
        Term ?Text
+
              Term ?Text
 
        Type UNIQUE Biological_process
 
        Type UNIQUE Biological_process
 
        Cellular_component
 
        Cellular_component

Revision as of 18:33, 12 June 2013

Updating the go.ace File - Script Specifications

  • Output file: go.ace

WormBase ?GO_term Model:

    ?GO_term  Name	?Text
              Definition	?Text
              Term	?Text

Type UNIQUE Biological_process Cellular_component Molecular_function Child Instance ?GO_term XREF Instance_of Component ?GO_term XREF Component_of Parent Instance_of ?GO_term XREF Instance Component_of ?GO_term XREF Component Attributes_of Cell ?Cell XREF GO_term Motif ?Motif XREF GO_term Gene ?Gene XREF GO_term CDS ?CDS XREF GO_term Sequence ?Sequence XREF GO_term Transcript ?Transcript XREF GO_term Pseudogene ?Pseudogene XREF GO_term Phenotype ?Phenotype XREF GO_term Index Ancestor ?GO_term XREF Descendent Descendent ?GO_term XREF Ancestor Anatomy_term ?Anatomy_term XREF GO_term Homology_group ?Homology_group XREF GO_term Expr_pattern ?Expr_pattern XREF GO_term Picture ?Picture XREF Cellular_component Version UNIQUE Text UNIQUE Text