Difference between revisions of "Updating go.ace file"
(Created page with ''''Updating the go.ace File - Script Specifications''' *Input file: http://www.geneontology.org/ontology/obo_format_1_2/gene_ontology_ext.obo *Output file: go.ace WormBase ?GO…') |
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WormBase ?GO_term Model: | WormBase ?GO_term Model: | ||
| − | ?GO_term Name ?Text | + | ?GO_term Name ?Text |
| − | + | Definition ?Text | |
| − | + | Term ?Text | |
| − | + | Type UNIQUE Biological_process | |
| − | + | Cellular_component | |
| − | + | Molecular_function | |
| − | + | Child Instance ?GO_term XREF Instance_of | |
| − | + | Component ?GO_term XREF Component_of | |
| − | + | Parent Instance_of ?GO_term XREF Instance | |
| − | + | Component_of ?GO_term XREF Component | |
| − | + | Attributes_of Cell ?Cell XREF GO_term | |
| − | + | Motif ?Motif XREF GO_term | |
| − | + | Gene ?Gene XREF GO_term | |
| − | + | CDS ?CDS XREF GO_term | |
| − | + | Sequence ?Sequence XREF GO_term | |
| − | + | Transcript ?Transcript XREF GO_term | |
| − | + | Pseudogene ?Pseudogene XREF GO_term | |
| − | + | Phenotype ?Phenotype XREF GO_term | |
| − | + | Index Ancestor ?GO_term XREF Descendent | |
| − | + | Descendent ?GO_term XREF Ancestor | |
| − | + | Anatomy_term ?Anatomy_term XREF GO_term | |
| − | + | Homology_group ?Homology_group XREF GO_term | |
| − | + | Expr_pattern ?Expr_pattern XREF GO_term | |
| − | + | Picture ?Picture XREF Cellular_component | |
| − | + | Version UNIQUE Text UNIQUE Text | |
Revision as of 18:32, 12 June 2013
Updating the go.ace File - Script Specifications
- Output file: go.ace
WormBase ?GO_term Model:
?GO_term Name ?Text
Definition ?Text Term ?Text Type UNIQUE Biological_process Cellular_component Molecular_function Child Instance ?GO_term XREF Instance_of Component ?GO_term XREF Component_of Parent Instance_of ?GO_term XREF Instance Component_of ?GO_term XREF Component Attributes_of Cell ?Cell XREF GO_term Motif ?Motif XREF GO_term Gene ?Gene XREF GO_term CDS ?CDS XREF GO_term Sequence ?Sequence XREF GO_term Transcript ?Transcript XREF GO_term Pseudogene ?Pseudogene XREF GO_term Phenotype ?Phenotype XREF GO_term Index Ancestor ?GO_term XREF Descendent Descendent ?GO_term XREF Ancestor Anatomy_term ?Anatomy_term XREF GO_term Homology_group ?Homology_group XREF GO_term Expr_pattern ?Expr_pattern XREF GO_term Picture ?Picture XREF Cellular_component Version UNIQUE Text UNIQUE Text
