Difference between revisions of "Specifications for a GAF for gene-disease data"
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!Column !! Content !! Required? !! Cardinality !! Example | !Column !! Content !! Required? !! Cardinality !! Example | ||
|- | |- | ||
− | |1 || DB || required || 1 || WB | + | |1 ||DB||required|| 1 || WB |
|- | |- | ||
− | |2 || DB Object ID || required || 1 || | + | |2 ||DB Object ID||required|| 1 || WBGene00007799 |
+ | |- | ||
+ | |3 || DB Object Symbol || required || 1 || | ||
+ | |- | ||
+ | |4 || Qualifier || ''optional'' || 0 or greater || | ||
+ | |- | ||
+ | |5 || GO ID || required || 1 || | ||
+ | |- | ||
+ | |6 ||DB:Reference (|DB:Reference)||required||1 or greater|| | ||
+ | |- | ||
+ | |7 ||Evidence code||required||1|| | ||
+ | |- | ||
+ | |8 ||With (or) From||optional||0 or greater|| | ||
+ | |- | ||
+ | |9 || Aspect|| required||1|| | ||
+ | |- | ||
+ | |10||DB Object Name||optional||0 or 1|| | ||
+ | |- | ||
+ | |11||DB Object Synonym (|Synonym)||optional||0 or greater|| | ||
+ | |- | ||
+ | |12|| |
Revision as of 20:11, 6 February 2014
GAF 2.0 for gene-disease data includes all genes with the Experimental_model and Potential_model tags.
Column | Content | Required? | Cardinality | Example |
---|---|---|---|---|
1 | DB | required | 1 | WB |
2 | DB Object ID | required | 1 | WBGene00007799 |
3 | DB Object Symbol | required | 1 | |
4 | Qualifier | optional | 0 or greater | |
5 | GO ID | required | 1 | |
6 | DB:Reference) | required | 1 or greater | |
7 | Evidence code | required | 1 | |
8 | With (or) From | optional | 0 or greater | |
9 | Aspect | required | 1 | |
10 | DB Object Name | optional | 0 or 1 | |
11 | Synonym) | optional | 0 or greater | |
12 |