Difference between revisions of "Specifications for a Community Annotation Form"

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E-mail: Free text box
 
E-mail: Free text box
 +
 +
JC: Can the form map e-mail to WBPerson ID, if not alerts relevant person to create one.
  
 
2. ''Enter a gene name, example abc-1, the form will convert it to the appropriate WBGene ID.''   
 
2. ''Enter a gene name, example abc-1, the form will convert it to the appropriate WBGene ID.''   
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Gene: Drop-down, auto complete obo, same as WBGene field in most OA interfaces.
 
Gene: Drop-down, auto complete obo, same as WBGene field in most OA interfaces.
  
(Q: Should we allow users to enter genes not in WormBase, which means we will have to provide an extra free-text box.)
+
JC: Can there be a 'No match' option maybe right at the top, if user chooses this, then they will need to use a free text box, how do we force this sequence?
  
 
3. ''Choose the appropriate species.''
 
3. ''Choose the appropriate species.''
  
Species: Drop-down with predetermined values.
+
JC: Same feature, no match with free text box option, if desired species is not present in dr
 +
 
 +
Species: Autocomplete, Drop-down with predetermined values.
 +
 
 +
JC: Same feature, 'No Match' with free text box option, if desired species is not present.
  
(Q. Do we need this field?)
 
  
 
4.''Write a concise description for the gene you've chosen.''
 
4.''Write a concise description for the gene you've chosen.''
Line 23: Line 28:
 
Concise description: A big box for free-text, similar to the 'Description Text' box in the Concise Description OA.
 
Concise description: A big box for free-text, similar to the 'Description Text' box in the Concise Description OA.
  
5. ''Enter a published paper reference, either a PMID or a WBPaper identifier. Please note that WormBase will not accept meeting abstracts, Gazette articles or personal communications as references.''
+
5. ''Enter a published paper reference, either a PMID, WBPaper identifier or a DOI. Please note that WormBase will not accept meeting abstracts, Gazette articles or personal communications as references.''
  
 
Reference: Auto-complete obo
 
Reference: Auto-complete obo
  
(Should this be an autocomplete paper obo, or just a free text field to enter the identifier?)
+
JC: Same feature, 'No match'and free text box.
 +
 
 +
Also, once PMID or WBPaper is entered, can form pull up Paper information, meaning title etc etc, similar to

Revision as of 18:55, 13 May 2013

Description of fields

Since this is for the community, it might be worth having a short one-line instruction for each field (shown in italics here), on top of the box for entering data:


1. Enter your e-mail address.

E-mail: Free text box

JC: Can the form map e-mail to WBPerson ID, if not alerts relevant person to create one.

2. Enter a gene name, example abc-1, the form will convert it to the appropriate WBGene ID.

Gene: Drop-down, auto complete obo, same as WBGene field in most OA interfaces.

JC: Can there be a 'No match' option maybe right at the top, if user chooses this, then they will need to use a free text box, how do we force this sequence?

3. Choose the appropriate species.

JC: Same feature, no match with free text box option, if desired species is not present in dr

Species: Autocomplete, Drop-down with predetermined values.

JC: Same feature, 'No Match' with free text box option, if desired species is not present.


4.Write a concise description for the gene you've chosen.

Concise description: A big box for free-text, similar to the 'Description Text' box in the Concise Description OA.

5. Enter a published paper reference, either a PMID, WBPaper identifier or a DOI. Please note that WormBase will not accept meeting abstracts, Gazette articles or personal communications as references.

Reference: Auto-complete obo

JC: Same feature, 'No match'and free text box.

Also, once PMID or WBPaper is entered, can form pull up Paper information, meaning title etc etc, similar to