Difference between revisions of "Specifications for a Community Annotation Form"
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5. ''Choose a gene'' | 5. ''Choose a gene'' | ||
− | Enter a gene name | + | Enter a gene name (e.g., abc-1). Sequence names (e.g., AC3.4) and WBGene IDs (e.g., WBGene00000011) are allowed. If the WormBase gene you begin typing is present in the drop-down, the form will autocomplete the text. If you cannot find the gene in the drop-down, please enter it manually. |
Line 82: | Line 82: | ||
7. ''Enter a published paper reference, either a PMID, WBPaper identifier, or a DOI.'' | 7. ''Enter a published paper reference, either a PMID, WBPaper identifier, or a DOI.'' | ||
− | Please note that WormBase will not accept meeting abstracts, | + | Please note that WormBase will not accept meeting abstracts, gazette articles or personal communications as references. |
Revision as of 18:02, 22 May 2013
Description of fields
Since this is for the community, it might be worth having a short one-line instruction for each field (shown in italics here), on top of the box for entering data:
Please see guidelines on how to write a concise description:
http://wiki.wormbase.org/index.php/How_WormBase_writes_a_concise_description
1. Enter your first name.
Free text box; required
2. Enter your last name
Free text box; required
3. Enter a contact E-mail address
Free text box; required
4. Choose a species.
Autocomplete, Drop-down with predetermined values from the OA, if not found, free text is allowed.
- Caenorhabditis elegans
- Caenorhabditis sp. 3
- Panagrellus redivivus
- Cruznema tripartitum
- Caenorhabditis brenneri
- Caenorhabditis japonica
- Caenorhabditis briggsae
- Caenorhabditis remanei
- Pristionchus pacificus
- Brugia malayi
- Homo sapiens
5. Choose a gene
gin_locus gin_synonyms gin_seqname gin_wbgene this is the priority of how genes get autocompleted
J: If what is typed does not match, it stays as free-text
6.Write a concise description for the gene you've chosen.
Concise description: A big box for free-text, similar to the 'Description Text' box in the Concise Description OA.
7. Enter a published paper reference, either a PMID, WBPaper identifier or a DOI. Please note that WormBase will not accept meeting abstracts, Gazette articles or personal communications as references.
Free-text box allowing PMID or DOI.
Also, once PMID is entered, form pulls up Paper information, meaning title etc etc, similar to what P2GO does; Kimberly will talk to JC about it.
Mock-up of form with field titles and guidelines
1. Enter your first name. This field is required.
2. Enter your last name. This field is required.
3. Enter a contact E-mail address. This field is required.
4. Choose a species.
Start typing in a species, the form will autocomplete the text. If you cannot find the species in the drop-down, please enter it manually. This field is required.
5. Choose a gene
Enter a gene name (e.g., abc-1). Sequence names (e.g., AC3.4) and WBGene IDs (e.g., WBGene00000011) are allowed. If the WormBase gene you begin typing is present in the drop-down, the form will autocomplete the text. If you cannot find the gene in the drop-down, please enter it manually.
6. Write a concise description for the gene you've chosen.
Please see guidelines on writing a concise description: http://wiki.wormbase.org/index.php/How_WormBase_writes_a_concise_description
7. Enter a published paper reference, either a PMID, WBPaper identifier, or a DOI.
Please note that WormBase will not accept meeting abstracts, gazette articles or personal communications as references.