Difference between revisions of "Species available through WormBase (overview)"

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|[http://www.wormbase.org/db/seq/gbrowse/c_elegans yes]
 
|[http://www.wormbase.org/db/seq/gbrowse/c_elegans yes]
 
|[http://www.wormbase.org/db/searches/blast_blat BLAST Search]<br>genes, proteins, ests, genomic
 
|[http://www.wormbase.org/db/searches/blast_blat BLAST Search]<br>genes, proteins, ests, genomic
|[http://www.wormbase.org/db/searches/blast_blat BLAT Search] <br> genomics
+
|[http://www.wormbase.org/db/searches/blast_blat BLAT Search] <br> genomic
 
|[http://www.wormbase.org/db/gene/gene?name=WBGene00006763 Gene Summary]
 
|[http://www.wormbase.org/db/gene/gene?name=WBGene00006763 Gene Summary]
 
|[http://www.wormbase.org/db/seq/sequence Sequence Summary]
 
|[http://www.wormbase.org/db/seq/sequence Sequence Summary]

Revision as of 14:56, 6 January 2010

Species Genome
Browser
BLAST BLAT Genes Sequences Proteins Orthology
Brugia malayi yes
-missing name data for gene models
-gene page available for brigpep, remaneiX, and wormpep protein match features
BLAST Search
genomic, proteins
Caenorhabditis elegans yes BLAST Search
genes, proteins, ests, genomic
BLAT Search
genomic
Gene Summary Sequence Summary Protein Summary
Caenorhabditis brenneri genomic, proteins
Caenorhabditis briggsae Yes - includes nGASP predictions genes, proteins, ests, genomic genomic
Caenorhabditis japonica yes
- includes nGASP predictions
genomic Gene Summary Sequence Summary Protein Summary
Caenorhabditis remanei yes
- includes nGASP predictions
genomic, proteins Gene Summary Sequence Summary Protein Summary
Haemonchus contortus yes gbrowse_details
Meloidogyne hapla yes genomic gbrowse_details
Meloidogyne incognita
Pristionchus pacificus genomic, proteins