Difference between revisions of "Species available through WormBase (overview)"

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| [http://www.wormbase.org/db/gene/gene?name=WBGene00063512 Gene Summary]
 
| [http://www.wormbase.org/db/gene/gene?name=WBGene00063512 Gene Summary]
| [http://www.wormbase.org/db/seq/sequence?name=CRE02979;class=Gene_name Sequence Summary] <br> -error probably with inline image
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| [http://www.wormbase.org/db/seq/sequence?name=CRE02979;class=Gene_name Sequence Summary] <br> -error probably with inline image issue, shows up right in dev
 
| [http://www.wormbase.org/db/seq/protein?name=CRE02979;class=CDS Protein Summary]
 
| [http://www.wormbase.org/db/seq/protein?name=CRE02979;class=CDS Protein Summary]
 
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Revision as of 12:20, 5 January 2010

Species Genome
Browser
BLAST BLAT Genes Sequences Proteins Orthology
Brugia malayi yes
-missing name data for gene models
-gene page available for brigpep, remaneiX, and wormpep protein match features
BLAST Search
genomic, proteins
Caenorhabditis elegans yes BLAST Search
genes, proteins, ests, genomic
BLAT Search Gene Summary Sequence Summary Protein Summary
Caenorhabditis brenneri genomic, proteins
Caenorhabditis briggsae Yes - includes nGASP predictions genes, proteins, ests, genomic genomic
Caenorhabditis japonica yes
- includes nGASP predictions
- bug: when click 'update image' all toggle buttons disappear, this happens with other species too
genomic Gene Summary Sequence Summary Protein Summary
Caenorhabditis remanei [1]
- includes nGASP predictions
genomic, proteins Gene Summary Sequence Summary
-error probably with inline image issue, shows up right in dev
Protein Summary
Haemonchus contortus
Meloidogyne hapla genomic
Meloidogyne incognita
Pristionchus pacificus genomic, proteins