Difference between revisions of "Species available through WormBase (overview)"
From WormBaseWiki
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|[[Caenorhabditis japonica|''Caenorhabditis japonica'']] | |[[Caenorhabditis japonica|''Caenorhabditis japonica'']] | ||
| − | | [http://www.wormbase.org/db/seq/gbrowse/c_japonica yes]<br>-bug: when click 'update image' all toggle buttons disappear, this happens with other species too | + | | [http://www.wormbase.org/db/seq/gbrowse/c_japonica yes] <br>- includes nGASP predictions <br>- bug: when click 'update image' all toggle buttons disappear, this happens with other species too |
| genomic | | genomic | ||
| | | | ||
Revision as of 12:02, 5 January 2010
| Species | Genome Browser |
BLAST | BLAT | Genes | Sequences | Proteins | Orthology |
| Brugia malayi | yes -missing name data for gene models -gene page available for brigpep, remaneiX, and wormpep protein match features |
BLAST Search genomic, proteins |
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| Caenorhabditis elegans | yes | BLAST Search genes, proteins, ests, genomic |
BLAT Search | Gene Summary | Sequence Summary | Protein Summary | |
| Caenorhabditis brenneri | |||||||
| Caenorhabditis briggsae | Yes - includes nGASP predictions | genes, proteins, ests, genomic | genomic | ||||
| Caenorhabditis japonica | yes - includes nGASP predictions - bug: when click 'update image' all toggle buttons disappear, this happens with other species too |
genomic | Gene Summary | Sequence Summary | Protein Summary | ||
| Caenorhabditis remanei | genomic | proteins | |||||
| Haemonchus contortus | |||||||
| Meloidogyne hapla | |||||||
| Meloidogyne incognita | |||||||
| Pristionchus pacificus | |||||||
