Difference between revisions of "Species available through WormBase (overview)"

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|[[Caenorhabditis japonica|''Caenorhabditis japonica'']]
 
|[[Caenorhabditis japonica|''Caenorhabditis japonica'']]
| [http://www.wormbase.org/db/seq/gbrowse/c_japonica yes]<br>-when click' update image' all toggle button disappear
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| [http://www.wormbase.org/db/seq/gbrowse/c_japonica yes]<br>-bug: when click 'update image' all toggle button disappear, this happens with other species too
 
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Revision as of 11:39, 5 January 2010

Species Genome
Browser
BLAST BLAT Genes Sequences Proteins Orthology
Brugia malayi yes
-missing name data for gene models
-gene page available for brigpep, remaneiX, and wormpep protein match features
BLAST Search
genomic, proteins
Caenorhabditis elegans yes BLAST Search
genes, proteins, ests, genomic
BLAT Search Gene Summary Sequence Summary Protein Summary
Caenorhabditis brenneri
Caenorhabditis briggsae Yes - includes nGASP predictions genes, proteins, ests, genomic genomic
Caenorhabditis japonica yes
-bug: when click 'update image' all toggle button disappear, this happens with other species too
Gene Summary Sequence Summary Protein Summary
Caenorhabditis remanei
Haemonchus contortus
Meloidogyne hapla
Meloidogyne incognita
Pristionchus pacificus