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• 20141022 - Phenotype2GO Pipeline
  ...ype2GO-based GO annotations will be handled for future WormBase builds and GO uploads. *If the perturbation is an RNAi experiment, we will only associate the GO annotations with phenotypes resulting from disruption of the primary target
  7 KB (1,164 words) - 17:54, 19 February 2015
• WBConfCall 2016.04.07-Agenda and Minutes
  ...staff can take vacations. They can also help develop new web tools. Short term goal: get low hanging fruits first (SPELL, ModSEEK ...) ...l give a talk about Textpresso central and mining, also have a workshop on GO curation and LEGO.
  2 KB (339 words) - 18:43, 8 April 2016
• Evidence Code Ontology
  ** Term * We'll only include the Term entries
  6 KB (834 words) - 17:56, 15 June 2020
• BASIC PROTOCOL 2: PERFORMING A DATABASE SEARCH
  1. Go to the main page, either by entering its URL http://wormbase.org, or by cli ...any). If a single data record is found, the search routine will sometimes go directly to the Web page for that record (it will automatically do this for
  3 KB (545 words) - 19:56, 11 August 2010
• WormBase gene association file
  ...ene Ontology consortium to specify how gene associations to Gene Ontology (GO) terms would be reported in a tab-delimited download file. http://geneontology.org/docs/go-annotation-file-gaf-format-2.0/
  12 KB (1,718 words) - 17:45, 5 February 2021
• WormBase Model:GO term
  Term ?Text ...Version UNIQUE Text UNIQUE Text // Lincoln, to store version number of GO
  2 KB (183 words) - 13:25, 4 October 2010
• WormBase-Caltech Weekly Calls October 2018
  * Will go ahead and send emails for only new set of papers (won't resend requests for * Maybe go back to papers that already had a request sent at the 6 month time point
  5 KB (818 words) - 15:55, 1 November 2018
• WS250 Models.wrm
  1) Remove the Term tag. The name of the GO_term would be populated in the 2) Add an Alt_id tag to populate secondary IDs as listed in the GO obo
  3 KB (433 words) - 08:32, 22 June 2015
• WormBase-Caltech Weekly Calls February 2017
  ...geal pumping phenotypes that were measured by EPGs be annotated with this term? These questions highlight a need to revisit the pharyngeal phenotype bran ...any other person interested in the group to help with pharyngeal phenotype term organization
  7 KB (1,073 words) - 16:26, 2 March 2017
• WormBase-Caltech Weekly Calls July 2019
  ** Phenotype, anatomy ontologies, GO, etc. === Anatomy term acronyms ===
  3 KB (427 words) - 15:32, 1 August 2019
• WormBase-Caltech Weekly Calls August 2013
  *GO Term [http://mangolassi.caltech.edu/~azurebrd/cgi-bin/testing/amigo/wobr/amigo.c **Main term and children, with annotation numbers (inferred, term and descendant annotations)
  5 KB (850 words) - 15:32, 5 September 2013
• WBConfCall 2018.03.01-Agenda and Minutes
  ...get done in the next 1.5 years (detailed), but include some info of longer term plans and challenges we think we will face. This sketch needs vision of the ...l processes involved in, and cellular localization based on Gene Ontology (GO data)
  4 KB (574 words) - 01:54, 2 March 2018
• Noctua - Upload of WB Manual Annotations
  https://github.com/geneontology/go-annotation/blob/master/specs/gpad-gpi-2-0.md ...he GPAD2.0 file, but no action needed as we don't have any negation in our GO OA annotations. || n/a
  10 KB (1,456 words) - 17:43, 9 November 2023
• PMID:26412237
  ! GO Annotation |'''MF - GO:0016929 SUMO-specific protease activity
  16 KB (1,999 words) - 18:24, 28 October 2015
• WormBase-Caltech Weekly Calls July 2014
  * Based on 3 GO categories and homology * Add tissue-specific expression, and go live
  4 KB (622 words) - 16:47, 6 August 2014
• TAIR
  2) sentences from papers already curated by TAIR for GO Cellular Component 3) sentences from papers not curated by TAIR for GO Cellular Component
  14 KB (2,091 words) - 16:28, 9 December 2010
• Topic Curation
  Do you want the name of the genes for the Tier IIs, so you can add your GO-terms, etc? == UPR GO Terms & Associated Genes ==
  10 KB (1,194 words) - 16:35, 13 December 2013
• WormBase-Caltech Weekly Calls June 2015
  * Added link in WBPerson term info to Person page with publications showing ** Not sure we came to an agreement; will go ahead with trying this
  6 KB (982 words) - 15:33, 2 July 2015
• WormBase-Caltech Weekly Calls July 2012
  *Not caught up on RNAi and allele curation by end of this term *Logical extensions to GO (we will discuss next week)
  6 KB (944 words) - 16:25, 1 November 2012
• UserGuide:Neurobrowse
  ...Neurobrowse URL]. Alternatively, Neurobrowse is linked on specific Anatomy Term pages in WormBase. ..." box, at the upper left corner of the NBrowse window, and click the green GO button. For example, one queries for R2AR, a neuron in the male sensory ray
  2 KB (256 words) - 22:25, 5 August 2019

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