Search results

Create the page "WormBase Model:Briggsae genomic" on this wiki! See also the search results found.

• INTRODUCTION
  ...connectivity. Also, WormBase contains sequence and gene structures of ''C. briggsae'' and ''C. remanei'', two closely related worms. These data are interconnec ...n of WormBase available in September, 2005 (WS147 release; BioPerl/Generic Model Organism Database software).
  2 KB (365 words) - 00:06, 1 December 2010
• WS183
  New release of WormBase WS183, Wormpep183 and Wormrna183 Tue Oct 16 16:18:34 BST 2007 human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins.
  7 KB (800 words) - 10:01, 8 November 2007
• WS146
  <pre>New release of WormBase WS146, Wormpep146 and Wormrna146 Thu Jul 28 14:01:21 BST 2005 human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins.
  6 KB (670 words) - 11:09, 21 December 2011
• WormBase Model:Sequence
  [[WormBase Models]] == Model ==
  12 KB (1,258 words) - 09:29, 5 October 2010
• Caenorhabditis angaria
  6 Oct 2010: The latest changes to the assembly are due to be added to WormBase in release WS221. ...this is done, we are happy to turn the ownership of the genome sequence to WormBase. - Paul Sternberg.
  3 KB (437 words) - 16:02, 15 December 2011
• WS173
  New release of WormBase WS173, Wormpep173 and Wormrna173 Fri Mar 23 18:22:22 GMT 2007 human, fly, yeast, C. briggsae, and SwissProt &amp; TrEMBL proteins.
  6 KB (639 words) - 10:55, 21 December 2011
• WS201
  New release of WormBase WS201, Wormpep201 and Wormrna201 Wed Mar 25 15:30:27 GMT 2009 human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins.
  6 KB (665 words) - 16:42, 21 December 2011
• WormBase Newsletter No. 3, October 2003
  == WormBase Version Freeze == ...WormBase, e. g., WS100 (http://ws100.wormbase.org) and WS110 (http://ws110.wormbase.org). These reference releases are available for perpetuity on dedicated se
  10 KB (1,509 words) - 15:40, 24 September 2007
• WS289
  New release of WormBase WS288 WS288 was built by Stavros Diamantakis with the input from the WormBase Community and Team. Thank you!
  16 KB (1,733 words) - 21:55, 11 May 2023
• WS228
  New release of WormBase WS228 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  14 KB (1,572 words) - 10:37, 11 November 2011
• WS182
  New release of WormBase WS182, Wormpep182 and Wormrna182 Thu Sep 27 11:59:39 BST 2007 human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins.
  6 KB (716 words) - 16:48, 21 December 2011
• WS284
  New release of WormBase WS284 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES)
  17 KB (1,841 words) - 21:54, 11 May 2023
• WS234
  New release of WormBase WS234 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  15 KB (1,653 words) - 10:13, 18 January 2013
• WS227
  New release of WormBase WS227 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  15 KB (1,738 words) - 11:20, 21 December 2011
• WS176
  new release of WormBase WS176, Wormpep176 and Wormrna176 Mon May 21 11:58:06 BST 2007 human, fly, yeast, C. briggsae, and SwissProt &amp; TrEMBL proteins.
  7 KB (783 words) - 10:46, 21 December 2011
• WS235
  New release of WormBase WS235 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  15 KB (1,708 words) - 10:14, 18 January 2013
• WS206
  New release of WormBase WS206, Wormpep206 and Wormrna206 Fri Aug 28 13:06:57 BST 2009 human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins.
  7 KB (796 words) - 16:46, 21 December 2011
• WS230
  New release of WormBase WS230 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  17 KB (1,950 words) - 09:37, 7 February 2012
• WS231
  New release of WormBase WS231 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  16 KB (1,820 words) - 14:15, 13 September 2012
• WS232
  New release of WormBase WS232 WS232 was built by Michael Paulini [michael.paulini@wormbase.org]
  15 KB (1,729 words) - 14:15, 13 September 2012
• WS193
  <pre>New release of WormBase WS193, Wormpep193 and Wormrna193 Fri Jul 25 22:12:15 BST 2008 human, fly, yeast, C. briggsae, and SwissProt &amp; TrEMBL proteins.
  8 KB (944 words) - 16:52, 21 December 2011
• WS223
  New release of WormBase WS223, Wormpep223 and Wormrna223 Mon Jan 24 12:12:08 GMT 2011 genomes DIR - contains a sub dir for each WormBase species with sequence, gff, and agp data
  15 KB (1,610 words) - 11:20, 21 December 2011
• WS174
  human, fly, yeast, C. briggsae, and SwissProt &amp; TrEMBL proteins. xii) best_blastp_hits_brigprot.WS174.gz - for each C. briggsae protein, lists Best blastp match to
  8 KB (938 words) - 10:54, 21 December 2011
• WS224
  New release of WormBase WS224, Wormpep224 and Wormrna224 Fri Mar 4 14:58:13 GMT 2011 genomes DIR - contains a sub dir for each WormBase species with sequence, gff, and agp data
  15 KB (1,583 words) - 11:13, 21 December 2011
• WS222
  New release of WormBase WS222, Wormpep222 and Wormrna222 Mon Dec 20 12:07:08 GMT 2010 WS222 was built by Michael Paulini (michael.paulini@wormbase.org)
  15 KB (1,647 words) - 10:06, 22 December 2010
• WS226
  New release of WormBase WS226 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  21 KB (2,346 words) - 11:15, 21 December 2011
• WS233
  New release of WormBase WS233 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  17 KB (2,002 words) - 14:17, 13 September 2012
• WS221
  New release of WormBase WS221, Wormpep221 and Wormrna221 Tue Nov 23 12:32:16 GMT 2010 genomes DIR - contains a sub dir for each WormBase species with sequence, gff, and agp data
  17 KB (1,758 words) - 16:47, 21 December 2011
• WS229
  New release of WormBase WS229 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  17 KB (1,988 words) - 11:15, 21 December 2011
• WS225
  New release of WormBase WS225, Wormpep225 and Wormrna225 Tue Apr 5 11:57:03 BST 2011 genomes DIR - contains a sub dir for each WormBase species with sequence, gff, and agp data
  16 KB (1,674 words) - 11:38, 20 April 2011
• WS218
  New release of WormBase WS218, Wormpep218 and Wormrna218 Tue Aug 24 genomes DIR - contains a sub dir for each WormBase species with
  15 KB (1,756 words) - 11:21, 21 December 2011
• WS220
  New release of WormBase WS220, Wormpep220 and Wormrna220 Mon Oct 25 13:22:36 BST 2010 genomes DIR - contains a sub dir for each WormBase species with sequence, gff, and agp data
  16 KB (1,762 words) - 11:10, 21 December 2011
• WS219
  New release of WormBase WS219, Wormpep219 and Wormrna219 Tue Oct 5 16:04:14 BST 2010 WS219 was built by [Michael Paulini (michael.paulini@wormbase.org)]
  15 KB (1,622 words) - 11:11, 21 December 2011
• Software Life Cycle: 1. Updating The Development Server
  https://docs.google.com/a/wormbase.org/document/d/1oPpj8d5gibUc-gpUZorl6ETT5baE6mp-v2bMedKauiA/edit# This document describes the process of staging a new release of WormBase on the development server.
  25 KB (3,632 words) - 03:11, 28 October 2013
• WormBase Paper Categorization
  * Topics commonly studied in C. elegans due to its advantages as a model system **Genomic classification of protein-coding gene families
  10 KB (1,279 words) - 18:20, 18 October 2013
• WormMine
  [http://intermine.wormbase.org/tools/wormmine/begin.do WormMine] [https://github.com/WormBase/intermine WormMine Github]
  15 KB (2,088 words) - 16:16, 15 October 2020
• FAQs
  ...ww.wormbase.org/about/Frequently_asked_questions FAQ pages] on the new www.wormbase.org site. === How should I cite WormBase? ===
  67 KB (10,954 words) - 09:22, 19 February 2013
• COMMENTARY
  ...nomic sequence has been aligned to orthologous sites in the genome of ''C. briggsae'', a sibling species of ''C. elegans'' (Stein et al., 2003). Finally, there ...elopers group actively invites suggestions for improvement from users, and WormBase's source code is freely available for local installation and improvement.
  30 KB (4,765 words) - 20:03, 11 August 2010
• UserGuide:Reivsed Nomenclature
  .../p><h2>Genomes, assemblies, clones and contigs</h2><p>Reference genomes in WormBase are given version names, for example <i>C. elegans</i> has the version name ...d, being left as various sizes of contig. Only <i>C. elegans</i> and <i>C. briggsae</i> have been assembled into chromosomes.
  56 KB (9,520 words) - 11:51, 21 October 2015
• UserGuide:Revised Nomenclature
  .../p><h2>Genomes, assemblies, clones and contigs</h2><p>Reference genomes in WormBase are given version names, for example <i>C. elegans</i> has the version name ...d, being left as various sizes of contig. Only <i>C. elegans</i> and <i>C. briggsae</i> have been assembled into chromosomes.
  56 KB (9,514 words) - 09:48, 23 October 2015
• Updating WormBase
  WormBase is updated with each new build of the database released from Sanger. The li ...g or troubleshooting. This is especially true during cycles where the data model changes significantly.
  34 KB (5,450 words) - 18:24, 17 August 2010
• WS215
  <pre>New release of WormBase WS215, Wormpep215 and Wormrna215 Thu May 27 18:15:29 BST 2010 human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins.
  19 KB (1,735 words) - 11:07, 21 December 2011
• Searching WormBase for Information About C. elegans (Wiley)
  ...l connectivity. Also, WormBase contains sequence and gene structures of C. briggsae and C. remanei, two closely related worms. These data are interconnected, s ...n of WormBase available in September, 2005 (WS147 release; BioPerl/Generic Model Organism Database software).
  103 KB (16,375 words) - 23:39, 30 November 2010
• WS244 Models.wrm
  == Model changes for WS244 == * This cycle we see 5 model changes in 4 classes:
  235 KB (23,325 words) - 10:33, 3 July 2014