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Jump to navigationJump to search- 14:15, 24 November 2009 diff hist +35 November 25, 2009 - Sequence Curation Flags
- 14:13, 24 November 2009 diff hist +6 November 25, 2009 - Sequence Curation Flags →Current status of each flag
- 14:13, 24 November 2009 diff hist -20 November 25, 2009 - Sequence Curation Flags →Review potential pipelines and options for flagging
- 14:12, 24 November 2009 diff hist +683 N November 25, 2009 - Sequence Curation Flags New page: ==Call Information== 4:30pm GMT | 11:30am EST | 10:30am CST | 8:30am PST US: 1-877-384-2311, +1-480-629-1629 UK: 0800-358-3475, +44-207-154-0025 Canada: 1-866-243-1291 participant acc...
- 13:38, 24 November 2009 diff hist +71 Caltech documentation
- 13:33, 24 November 2009 diff hist +36 Gene-Paper Associations
- 12:36, 24 November 2009 diff hist +32 Gene-Paper Associations
- 12:19, 24 November 2009 diff hist +636 N Gene-Paper Associations New page: We have several options for making gene-paper associations: # The primary pipeline '''right now''' is a Perl script that automatically associates genes and proteins mentioned in paper and...
- 11:47, 24 November 2009 diff hist 0 Caltech documentation →Datatype curation
- 11:45, 24 November 2009 diff hist -2 Caltech documentation →Datatype curation
- 11:44, 24 November 2009 diff hist +31 Caltech documentation →Datatype curation
- 11:41, 24 November 2009 diff hist +88 Caltech documentation
- 11:40, 24 November 2009 diff hist -63 Caltech documentation →Datatype curation
- 11:35, 24 November 2009 diff hist +83 First-pass flagging pipelines →SVM (sfp)...not implemented yet
- 17:37, 20 November 2009 diff hist +42 Caltech documentation →SVMs for First Pass Curation
- 17:35, 20 November 2009 diff hist +27 TAIR
- 16:53, 20 November 2009 diff hist +2 TAIR
- 16:53, 20 November 2009 diff hist +282 N TAIR New page: Gene Ontology Curation at TAIR '''11/20/2009'''ACTION ITEM: Check with Tanya about possibility of performing SVMs for TAIR and setting up an SVM -> Textpresso Category pipeline for TAIT. ...
- 16:46, 20 November 2009 diff hist +21 Gene Ontology
- 16:45, 20 November 2009 diff hist +5 FlyBase
- 16:43, 20 November 2009 diff hist +325 FlyBase
- 16:29, 20 November 2009 diff hist +6 Gene Ontology
- 16:27, 20 November 2009 diff hist +4 Gene Ontology
- 16:26, 20 November 2009 diff hist +476 Gene Ontology
- 16:11, 20 November 2009 diff hist +81 How to make a new Textpresso category
- 15:49, 20 November 2009 diff hist +15 How to make a new Textpresso category
- 15:48, 20 November 2009 diff hist +39 How to make a new Textpresso category
- 15:47, 20 November 2009 diff hist +819 How to make a new Textpresso category
- 15:25, 20 November 2009 diff hist +1 How to make a new Textpresso category
- 15:24, 20 November 2009 diff hist -53 How to make a new Textpresso category
- 15:23, 20 November 2009 diff hist +1,024 How to make a new Textpresso category
- 15:04, 20 November 2009 diff hist +89 How to make a new Textpresso category
- 15:03, 20 November 2009 diff hist +614 N How to make a new Textpresso category New page: '''Do I need to make a new category?'' Textpresso categories are an excellent tool for finding specific information in the literature. The current ''C. elegans'' implementation...
- 13:55, 20 November 2009 diff hist +85 SVM Guidelines
- 13:53, 20 November 2009 diff hist -4 SVM Guidelines
- 13:51, 20 November 2009 diff hist +43 Caltech documentation →Textpresso
- 13:50, 20 November 2009 diff hist +4 SVM Guidelines
- 13:49, 20 November 2009 diff hist +7 SVM Guidelines
- 13:48, 20 November 2009 diff hist -5 SVM Guidelines
- 13:47, 20 November 2009 diff hist +86 SVM Guidelines
- 13:46, 20 November 2009 diff hist +155 SVM Guidelines
- 13:44, 20 November 2009 diff hist +5 SVM Guidelines
- 13:43, 20 November 2009 diff hist +1 Gene Ontology
- 13:43, 20 November 2009 diff hist +35 Gene Ontology
- 13:42, 20 November 2009 diff hist +8 FlyBase
- 13:32, 20 November 2009 diff hist -11 SVM Guidelines
- 13:31, 20 November 2009 diff hist +12 SVM Guidelines
- 13:31, 20 November 2009 diff hist +314 SVM Guidelines
- 13:23, 20 November 2009 diff hist +28 SVM Guidelines
- 13:22, 20 November 2009 diff hist -1 SVM Guidelines
- 13:20, 20 November 2009 diff hist +24 SVM Guidelines
- 13:19, 20 November 2009 diff hist +667 SVM Guidelines
- 13:14, 20 November 2009 diff hist +324 N SVM Guidelines New page: To be trained, SVMs require positive and negative training sets. Ideally and since there is sometimes discrepancy between what has been flagged and what has actually been curated, the bes...
- 13:08, 20 November 2009 diff hist +1 What are SVMs? current
- 13:08, 20 November 2009 diff hist +47 What are SVMs?
- 13:06, 20 November 2009 diff hist +722 N What are SVMs? New page: SVMs (Support Vector Machines) are machine learning algorithms that can be used to classify objects. In the context of first pass curation, SVMs are used to classify documents with respec...
- 12:56, 20 November 2009 diff hist +20 Caltech documentation
- 12:54, 20 November 2009 diff hist +14 Caltech documentation
- 12:53, 20 November 2009 diff hist +40 Caltech documentation
- 12:51, 20 November 2009 diff hist +215 FlyBase
- 12:05, 20 November 2009 diff hist +112 DictyBase
- 12:02, 20 November 2009 diff hist +63 N FlyBase New page: '''11/20/09''' FlyBase GO_cur flag Back to Gene Ontology
- 11:50, 20 November 2009 diff hist +1 DictyBase
- 11:50, 20 November 2009 diff hist +27 DictyBase
- 11:44, 20 November 2009 diff hist +13 DictyBase
- 11:43, 20 November 2009 diff hist +339 DictyBase
- 11:34, 20 November 2009 diff hist +89 N DictyBase New page: 11/11/2009 Pascale, Petra finished uploading of dicty papers for Cellular Component SVM.
- 11:17, 20 November 2009 diff hist +48 Gene Ontology
- 12:17, 19 November 2009 diff hist +27 Paper Pipeline
- 12:15, 19 November 2009 diff hist +20 Merging Papers
- 12:15, 19 November 2009 diff hist -21 Merging Papers
- 12:13, 19 November 2009 diff hist +40 Merging Papers
- 12:11, 19 November 2009 diff hist +1,714 N Merging Papers New page: Merging papers: In paper merges there is a paper that will acquire a merge (and get an Acquires_merge tag in the .ace file) and a paper that is being merged into another (will get a Merge...
- 11:58, 19 November 2009 diff hist +76 Paper Pipeline
- 13:34, 16 November 2009 diff hist +8 New Paper Model - Model and Changes to Pipeline
- 13:31, 16 November 2009 diff hist +23 New Paper Model - Model and Changes to Pipeline
- 14:43, 12 November 2009 diff hist -2,629 In book
- 14:42, 12 November 2009 diff hist +7,089 N In book New page: Here is all of the information about the In_book tag. The new model has removed the In_book tag, since the existing Contains and Contained_in tags can handle this relationship. All books...
- 14:34, 12 November 2009 diff hist +13 New Paper Model - Model and Changes to Pipeline
- 13:23, 12 November 2009 diff hist +29 Erratum in and Erratum for
- 13:23, 12 November 2009 diff hist +28 New Paper Model - Model and Changes to Pipeline
- 13:21, 12 November 2009 diff hist +184 Erratum in and Erratum for
- 13:19, 12 November 2009 diff hist +29 Erratum in and Erratum for
- 13:15, 12 November 2009 diff hist +274 Erratum in and Erratum for
- 13:05, 12 November 2009 diff hist +7 Erratum in and Erratum for
- 13:03, 12 November 2009 diff hist +80 Erratum in and Erratum for
- 13:02, 12 November 2009 diff hist +693 Erratum in and Erratum for
- 12:41, 12 November 2009 diff hist +66 New Paper Model - Model and Changes to Pipeline
- 12:39, 12 November 2009 diff hist +59 New Paper Model - Model and Changes to Pipeline
- 12:39, 12 November 2009 diff hist +89 New Paper Model - Model and Changes to Pipeline
- 12:34, 12 November 2009 diff hist +526 N Erratum in and Erratum for New page: There are 3 papers that currently use the Erratum tag. Here's how we'll populate the data in the new model: WBPaper00004137 has a published erratum, WBPaper00004301 WBPaper00004137 Err...
- 11:42, 12 November 2009 diff hist +137 New Paper Model - Model and Changes to Pipeline
- 11:29, 12 November 2009 diff hist +4,521 N New Paper Model - Model and Changes to Pipeline New page: Name CGC_name ?Paper_name XREF CGC_name_for PMID ?Paper_name XREF PMID_for Medline_name ?Paper_name XREF Medline_name_for Mee...
- 11:25, 12 November 2009 diff hist +53 Paper Pipeline
- 15:09, 12 August 2009 diff hist +19 Paper Pipeline - To Do List →Long-Term
- 15:06, 12 August 2009 diff hist +69 Paper Pipeline - To Do List →Long-Term
- 17:12, 29 July 2009 diff hist +32 Paper Pipeline - To Do List →Long-Term
- 13:43, 23 July 2009 diff hist -8 Paper Pipeline - To Do List →Short-Term
- 11:51, 23 July 2009 diff hist +1,221 Textpresso →GO cellular component
- 10:55, 23 July 2009 diff hist -1 Paper Type →Publication Types in WormBase