User contributions
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Jump to navigationJump to search- 15:19, 20 December 2012 diff hist +40 WBConfCall 2012.12.20-Agenda and Minutes →open tickets
- 16:31, 18 December 2012 diff hist -370 WBConfCall 2012.12.20-Agenda and Minutes →Proposed Model changes
- 13:09, 7 December 2012 diff hist +10 WBConfCall 2012.12.20-Agenda and Minutes →Advisory Board Meeting
- 09:42, 7 December 2012 diff hist +23 WB-ABM-2013-Agenda
- 09:41, 7 December 2012 diff hist +221 N WB-ABM-2013-Agenda Created page with '= Advisory Board Meeting = == Agenda == === Presentations === == Other meeting details == == What might WormBase want to do in the future? == == What does WormBase need to …'
- 09:40, 7 December 2012 diff hist +48 WBConfCall 2012.12.20-Agenda and Minutes →Advisory Board Meeting
- 09:37, 7 December 2012 diff hist +180 WBConfCall 2012.12.20-Agenda and Minutes →Advisory Board Meeting
- 09:28, 7 December 2012 diff hist -24 WBConfCall 2012.12.20-Agenda and Minutes →HelpDesk
- 09:28, 7 December 2012 diff hist +175 WBConfCall 2012.12.20-Agenda and Minutes →WASHU
- 09:27, 7 December 2012 diff hist +100 WBConfCall 2012.12.20-Agenda and Minutes →Advisory Board Meeting
- 09:25, 7 December 2012 diff hist +241 WBConfCall 2012.12.20-Agenda and Minutes →Proposed for inclusion in WS236
- 09:24, 7 December 2012 diff hist +801 N WBConfCall 2012.12.20-Agenda and Minutes Created page with '= Proposed Model changes = Link to the model changes proposed for WS236 WS236_Models.wrm Link to human disease model changes [[Model_changes_to_capture_and_consolidate_human…'
- 09:22, 7 December 2012 diff hist +73 Help desk schedule →2012 Officers
- 14:59, 24 July 2012 diff hist +124 FAQs →General Questions
- 14:07, 5 July 2012 diff hist +15 ModENCODE Integration status →Nucleosome mapping current
- 14:07, 5 July 2012 diff hist +15 ModENCODE Integration status →Genome wide chromatin profiling in C. elegans
- 14:06, 5 July 2012 diff hist +15 ModENCODE Integration status →Chromatin ChIP-seq
- 14:06, 5 July 2012 diff hist +15 ModENCODE Integration status →Chromatin ChIP-chip
- 14:06, 5 July 2012 diff hist +15 ModENCODE Integration status →Chromatin ChIP-chip of non-Histone Chromosomal Proteins in C. elegans
- 14:05, 5 July 2012 diff hist 0 ModENCODE Integration status →ChIP-Seq Identification of C. elegans TF Binding Sites
- 14:05, 5 July 2012 diff hist -21 ModENCODE Integration status →ChIP-Seq Identification of C. elegans TF Binding Sites
- 14:04, 5 July 2012 diff hist -36 ModENCODE Integration status →Chromatin ChIP-chip of non-Histone Chromosomal Proteins in C. elegans
- 14:03, 5 July 2012 diff hist -36 ModENCODE Integration status →Chromatin ChIP-chip
- 14:03, 5 July 2012 diff hist -36 ModENCODE Integration status →Chromatin ChIP-seq
- 14:03, 5 July 2012 diff hist -36 ModENCODE Integration status →Chromatin ChIP-chip of Modified Histones in C. elegans
- 14:02, 5 July 2012 diff hist -36 ModENCODE Integration status →Genome wide chromatin profiling in C. elegans
- 14:02, 5 July 2012 diff hist -36 ModENCODE Integration status →Nucleosome mapping
- 10:16, 11 June 2012 diff hist +33 Tools current
- 13:04, 3 May 2012 diff hist +141 ModENCODE Integration status →Definition of comprehensive set of C. briggsae transcripts and expression for various stages and conditions
- 15:27, 2 May 2012 diff hist +49 ModENCODE Integration status →Identification of tissue and stage-specific transcribed sequences with expression profile maps
- 11:30, 2 May 2012 diff hist +49 ModENCODE Integration status →Identification of transcribed sequences under pathogenic bacterial growth conditions with expression profile maps
- 11:29, 2 May 2012 diff hist -63 ModENCODE Integration status →Identification of tissue and stage-specific transcribed sequences with expression profile maps
- 11:28, 2 May 2012 diff hist -63 ModENCODE Integration status →Transcriptional profiling of C. elegans N2 embryos
- 11:27, 2 May 2012 diff hist -63 ModENCODE Integration status →Assaying RNA Expression in C. elegans
- 14:21, 30 April 2012 diff hist +150 ModENCODE Integration status →Identification of tissue and stage-specific transcribed sequences with expression profile maps
- 11:12, 26 April 2012 diff hist +28 ModENCODE Integration status →Transcriptional profiling of C. elegans N2 embryos
- 10:44, 26 April 2012 diff hist +156 ModENCODE Integration status →Assaying RNA Expression in C. elegans
- 10:07, 26 April 2012 diff hist +90 ModENCODE Integration status →Identification of tissue and stage-specific transcribed sequences with expression profile maps
- 10:04, 26 April 2012 diff hist -230 ModENCODE Integration status →Identification of transcribed sequences under pathogenic bacterial growth conditions with expression profile maps
- 16:01, 25 April 2012 diff hist 0 ModENCODE Integration status →A spatial and temporal map of C. elegans gene expression. Spencer WC, Zeller G, Watson JD, Henz SR, Watkins KL, McWhirter RD, Petersen S, Sreedharan VT, Widmer C…Genome Research, 21, pp 325-341,
- 16:01, 25 April 2012 diff hist +194 ModENCODE Integration status →A spatial and temporal map of C. elegans gene expression.Spencer WC, Zeller G, Watson JD, Henz SR, Watkins KL, McWhirter RD, Petersen S, Sreedharan VT, Widmer C…Genome Research, 21, pp 325-341,
- 15:56, 25 April 2012 diff hist -1 ModENCODE Integration status →A spatial and temporal map of C. elegans gene expression.Spencer WC, Zeller G, Watson JD, Henz SR, Watkins KL, McWhirter RD, Petersen S, Sreedharan VT, Widmer C…Genome Research, 21, pp 325-341,
- 15:55, 25 April 2012 diff hist +69 ModENCODE Integration status →Identification of tissue and stage-specific transcribed sequences with expression profile maps
- 15:55, 25 April 2012 diff hist +230 ModENCODE Integration status →Identification of transcribed sequences under pathogenic bacterial growth conditions with expression profile maps
- 15:52, 25 April 2012 diff hist 0 ModENCODE Integration status →Identification of tissue and stage-specific transcribed sequences with expression profile maps
- 15:52, 25 April 2012 diff hist +161 ModENCODE Integration status →Identification of tissue and stage-specific transcribed sequences with expression profile maps
- 15:47, 25 April 2012 diff hist +3 ModENCODE Integration status →Assaying RNA Expression in C. elegans
- 15:46, 25 April 2012 diff hist +43 ModENCODE Integration status →Transcriptional profiling of C. elegans N2 embryos
- 15:39, 25 April 2012 diff hist +217 ModENCODE Integration status →Assaying RNA Expression in C. elegans
- 14:55, 25 April 2012 diff hist -1 ModENCODE Integration status →Identification of transcribed sequences under pathogenic bacterial growth conditions with expression profile maps
- 10:57, 20 April 2012 diff hist +51 ModENCODE Integration status →Changes in expression of small RNAs during aging in C. elegans
- 10:56, 20 April 2012 diff hist +51 ModENCODE Integration status →Changes in expression of small RNAs under stress conditions in C. elegans
- 10:56, 20 April 2012 diff hist +51 ModENCODE Integration status →Small RNA expression in C. elegans embryos
- 15:14, 19 April 2012 diff hist -40 ModENCODE Integration status →SL Acceptor Site Confirmation in C. elegans
- 14:51, 19 April 2012 diff hist +190 ModENCODE Integration status →Genome-wide analysis of alternative splicing in Caenorhabditis elegans.Ramani AK, Calarco JA, Pan Q, Mavandadi S, Wang Y, Nelson AC, Lee LJ, Morris Q, Blencowe BJ…Genome Research, 21, pp 342-348,
- 14:35, 19 April 2012 diff hist +146 ModENCODE Integration status
- 14:00, 19 April 2012 diff hist +63 ModENCODE Integration status →Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data.Lu ZJ…Genome Research, 21, pp 286-300,
- 13:57, 19 April 2012 diff hist +84 ModENCODE Integration status →A global analysis of C. elegans trans-splicing.Allen MA, Hillier LW, Waterston RH, Blumenthal T.Genome Research, 21, pp 255-264,
- 13:53, 19 April 2012 diff hist +88 ModENCODE Integration status →Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans.Niu W, Lu ZJ, Zhong M, Sarov M, Murray JI, Brdlik CM, Janette J…Genome Research, 21, pp 245-254,
- 13:53, 19 April 2012 diff hist +76 ModENCODE Integration status →Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans.Niu W, Lu ZJ, Zhong M, Sarov M, Murray JI, Brdlik CM, Janette J…Genome Research, 21, pp 245-254,
- 13:48, 19 April 2012 diff hist +93 ModENCODE Integration status →High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans.Ercan S, Lubling Y, Segal E, Lieb JD.Genome Research, 21, pp 237-244,
- 13:48, 19 April 2012 diff hist -2 ModENCODE Integration status →Broad chromosomal domains of histone modification patterns in C. elegans.Liu T, Rechtsteiner A, Egelhofer TA, Vielle A, Latorre I, Cheung MS, Ercan S, Ikegami K…Genome Research, 21, pp 227-236,
- 13:46, 19 April 2012 diff hist -4 ModENCODE Integration status →Broad chromosomal domains of histone modification patterns in C. elegans.Liu T, Rechtsteiner A, Egelhofer TA, Vielle A, Latorre I, Cheung MS, Ercan S, Ikegami K…Genome Research, 21, pp 227-236,
- 13:46, 19 April 2012 diff hist -12 ModENCODE Integration status →Unlocking the secrets of the genome.Celniker SE, Dillon LA, Gerstein MB, Gunsalus KC, Henikoff S, Karpen GH, Kellis M, Lai EC, Lieb JD, MacAlpine DM, Micklem G, Piano F…Nature, 459, pp 927-930,
- 13:46, 19 April 2012 diff hist +96 ModENCODE Integration status →Broad chromosomal domains of histone modification patterns in C. elegans.Liu T, Rechtsteiner A, Egelhofer TA, Vielle A, Latorre I, Cheung MS, Ercan S, Ikegami K…Genome Research, 21, pp 227-236,
- 13:43, 19 April 2012 diff hist -44 ModENCODE Integration status →Definition of comprehensive set of C. elegans transcripts and expression for various stages and conditions
- 13:42, 19 April 2012 diff hist -47 ModENCODE Integration status →Transcription Start Site Confirmation in C. elegans
- 13:41, 19 April 2012 diff hist -57 ModENCODE Integration status →Reanalysis of comprehensive set of C. elegans transcripts and expression for various stages and conditions
- 13:40, 19 April 2012 diff hist +44 ModENCODE Integration status →Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.Gerstein MB, Lu ZJ, Van Nostrand EL, Cheng C, Arshinoff BI, Liu T, Yip KY…Science, 330 no. 6012, pp 1775-1787,
- 13:40, 19 April 2012 diff hist +36 ModENCODE Integration status →Genome-wide analysis of alternative splicing in Caenorhabditis elegans.Ramani AK, Calarco JA, Pan Q, Mavandadi S, Wang Y, Nelson AC, Lee LJ, Morris Q, Blencowe BJ…Genome Research, 21, pp 342-348,
- 13:39, 19 April 2012 diff hist +36 ModENCODE Integration status →A spatial and temporal map of C. elegans gene expression.Spencer WC, Zeller G, Watson JD, Henz SR, Watkins KL, McWhirter RD, Petersen S, Sreedharan VT, Widmer C…Genome Research, 21, pp 325-341,
- 13:39, 19 April 2012 diff hist +36 ModENCODE Integration status →Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data.Lu ZJ…Genome Research, 21, pp 286-300,
- 13:38, 19 April 2012 diff hist +42 ModENCODE Integration status →Multimodal RNA-seq using single-strand, double-strand, and CircLigase-based capture yields a refined and extended description of the C. elegans transcriptome.Lamm AT…Genome Research, 21, pp 265-275,
- 13:38, 19 April 2012 diff hist +36 ModENCODE Integration status →A global analysis of C. elegans trans-splicing.Allen MA, Hillier LW, Waterston RH, Blumenthal T.Genome Research, 21, pp 255-264,
- 13:38, 19 April 2012 diff hist +36 ModENCODE Integration status →Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans.Niu W, Lu ZJ, Zhong M, Sarov M, Murray JI, Brdlik CM, Janette J…Genome Research, 21, pp 245-254,
- 13:37, 19 April 2012 diff hist +36 ModENCODE Integration status →High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans.Ercan S, Lubling Y, Segal E, Lieb JD.Genome Research, 21, pp 237-244,
- 13:37, 19 April 2012 diff hist +36 ModENCODE Integration status →Broad chromosomal domains of histone modification patterns in C. elegans.Liu T, Rechtsteiner A, Egelhofer TA, Vielle A, Latorre I, Cheung MS, Ercan S, Ikegami K…Genome Research, 21, pp 227-236,
- 13:36, 19 April 2012 diff hist +36 ModENCODE Integration status →Unlocking the secrets of the genome.Celniker SE, Dillon LA, Gerstein MB, Gunsalus KC, Henikoff S, Karpen GH, Kellis M, Lai EC, Lieb JD, MacAlpine DM, Micklem G, Piano F…Nature, 459, pp 927-930,
- 13:36, 19 April 2012 diff hist +119 ModENCODE Integration status →ChIP-Seq Identification of C. elegans TF Binding Sites
- 13:35, 19 April 2012 diff hist +127 ModENCODE Integration status →Changes in expression of small RNAs during aging in C. elegans
- 13:35, 19 April 2012 diff hist +178 ModENCODE Integration status →Identification of transcribed sequences under pathogenic bacterial growth conditions with expression profile maps
- 13:34, 19 April 2012 diff hist +138 ModENCODE Integration status →Changes in expression of small RNAs under stress conditions in C. elegans
- 13:34, 19 April 2012 diff hist +172 ModENCODE Integration status →Definition of comprehensive set of C. briggsae transcripts and expression for various stages and conditions
- 13:33, 19 April 2012 diff hist +171 ModENCODE Integration status →Definition of comprehensive set of C. elegans transcripts and expression for various stages and conditions
- 13:33, 19 April 2012 diff hist +159 ModENCODE Integration status →Identification of tissue and stage-specific transcribed sequences with expression profile maps
- 13:32, 19 April 2012 diff hist +107 ModENCODE Integration status →Small RNA expression in C. elegans embryos
- 13:32, 19 April 2012 diff hist +115 ModENCODE Integration status →Transcriptional profiling of C. elegans N2 embryos
- 13:32, 19 April 2012 diff hist +102 ModENCODE Integration status →Assaying RNA Expression in C. elegans
- 13:31, 19 April 2012 diff hist +134 ModENCODE Integration status →Chromatin ChIP-chip of non-Histone Chromosomal Proteins in C. elegans
- 13:31, 19 April 2012 diff hist 0 ModENCODE Integration status →Chromatin ChIP-chip
- 13:30, 19 April 2012 diff hist +84 ModENCODE Integration status →Chromatin ChIP-chip
- 13:30, 19 April 2012 diff hist +107 ModENCODE Integration status →Validation of C. elegans miRNAs by qRT-PCR
- 13:29, 19 April 2012 diff hist +83 ModENCODE Integration status →Chromatin ChIP-seq
- 13:29, 19 April 2012 diff hist +119 ModENCODE Integration status →Chromatin ChIP-chip of Modified Histones in C. elegans
- 13:29, 19 April 2012 diff hist +116 ModENCODE Integration status →Transcription Start Site Confirmation in C. elegans
- 13:28, 19 April 2012 diff hist +107 ModENCODE Integration status →Identification of small RNAs in C. elegans
- 13:28, 19 April 2012 diff hist +84 ModENCODE Integration status →Genelet Gap Closing
- 13:27, 19 April 2012 diff hist +108 ModENCODE Integration status →Mass spectrometric validation of short ORFs
- 13:27, 19 April 2012 diff hist +98 ModENCODE Integration status →Intron Confirmation in C. elegans
- 13:26, 19 April 2012 diff hist +171 ModENCODE Integration status →Reanalysis of comprehensive set of C. elegans transcripts and expression for various stages and conditions