Difference between revisions of "Searching WormMine"

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== Searching WormMine ==
 
== Searching WormMine ==
 
  
 
=== Simple Search ===
 
=== Simple Search ===
 
  
 
There are two simple search boxes on WormMine's home page, one on the right of the tab bar and one just below it. Both boxes generate similar results and any term can be searched, such as:
 
There are two simple search boxes on WormMine's home page, one on the right of the tab bar and one just below it. Both boxes generate similar results and any term can be searched, such as:
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The result page will display all items related to the term searched, be it a gene, a CDS, a transcript, a protein, etc, and most of the links will lead to a WormBase main site pages for a more detailed perspective on the item.
 
The result page will display all items related to the term searched, be it a gene, a CDS, a transcript, a protein, etc, and most of the links will lead to a WormBase main site pages for a more detailed perspective on the item.
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[[File:simple_search_result_1.png]]

Revision as of 21:32, 12 November 2018

Searching WormMine

Simple Search

There are two simple search boxes on WormMine's home page, one on the right of the tab bar and one just below it. Both boxes generate similar results and any term can be searched, such as:

  • WormBase gene IDs, i.e. WBGene00000001
  • Sequence ID, i.e. Y110A7A.10
  • CDS Id, i.e. CDS:Y110A7A.10
  • Gene symbol, i.e. aap-1
  • GO term IDs, i.e. GO:000001
  • Keywords, i.e. kinase, homeobox

Simple search 1.png

Boolean searches (AND, OR, AND NOT, etc., all caps) and wildcards (*) are also available for some search terms, i.e. encodes AND homeobox, worm AND NOT embryo, kin*, among other possibilities.


The result page will display all items related to the term searched, be it a gene, a CDS, a transcript, a protein, etc, and most of the links will lead to a WormBase main site pages for a more detailed perspective on the item.


Simple search result 1.png