Difference between revisions of "Project meeting agendas and minutes"
| Line 35: | Line 35: | ||
plans and automation -- Kimberly, Ruihua | plans and automation -- Kimberly, Ruihua | ||
Phenotype curation and ontology -- Jolene, Gary | Phenotype curation and ontology -- Jolene, Gary | ||
| + | Strains, alleles, sequence features etc Mary Ann - Ant | ||
'''1400 - 1500''' Cell pages, Process pages, Interaction pages - OICR, Raymond, Karen (process pages) | '''1400 - 1500''' Cell pages, Process pages, Interaction pages - OICR, Raymond, Karen (process pages) | ||
| Line 44: | Line 45: | ||
'''1500 - 1600''' Large-scale datasets - | '''1500 - 1600''' Large-scale datasets - | ||
* microarrays & SPELL - Wen | * microarrays & SPELL - Wen | ||
| − | * | + | * modENCODE - Lincoln |
* non-modENCODE ChIP-seq and RNA-seq data | * non-modENCODE ChIP-seq and RNA-seq data | ||
| + | * C.elegans strain resequencing (what should we do?) - Ant | ||
lineageing and gene expression (Burglin, Waterston) -Raymond | lineageing and gene expression (Burglin, Waterston) -Raymond | ||
Revision as of 10:06, 4 January 2010
January 2010 Advisory Board Meeting, Caltech
Advisors Attending (at least these): Tim Schedl, Mark Blaxter, Bill Gelbart, Mike Cherry, Robin Gasser
Genome Genes Cells Process invite Makedonka
Monday, January 11
0900 - 0915 Introduction and Charge to Advisors --Paul Sternberg
0915 - 1015 Website
Todd:
- Usage
- Staffing
- Project management metrics & help desk enhancements
- OICR migration
- Frozen releases
- Redesign preview
1030 - 1130 Sequence curation including all those genomes
Sequence Curation C. elegans - Paul
Sequence Curation Tier II -
RNAseq (RGASP) - Gary
1130 - 1200 Sequence display
1200 - 1300 Lunch
1300 - 1400 Literature curation
progress
plans and automation -- Kimberly, Ruihua
Phenotype curation and ontology -- Jolene, Gary
Strains, alleles, sequence features etc Mary Ann - Ant
1400 - 1500 Cell pages, Process pages, Interaction pages - OICR, Raymond, Karen (process pages)
- Cell anatomy function curation
- Cell lineage information
- Cell neural connectivity
- Cell link in/out
1500 - 1600 Large-scale datasets -
- microarrays & SPELL - Wen
- modENCODE - Lincoln
- non-modENCODE ChIP-seq and RNA-seq data
- C.elegans strain resequencing (what should we do?) - Ant
lineageing and gene expression (Burglin, Waterston) -Raymond
1600 - 1645 Database issues (Ant)
* Brief build overview - Data aggregation - Mapping and cross reference creation - Similarity searches / orthology / synteny etc (mh to expand) : ensembl based stuff - Tier II builds (basically the same) - Tier III builds - Web database builds
1645 - 1700 Static pages and downloads
1700 - 1800 Overall Prioritization --Paul Sternberg
1800 Dinner
Tuesday January 11
0900 - 1200 Report and discussion with Advisors
Not sure where to put this, but don't want to forget to bring this up.
How should WormBase handle meeting abstracts (other than the International meeting)?
What meetings/abstracts should be included in WB?
Should WormBase provide a submission form for topical and regional meetings to facilitate handling abstracts?
'Tuesday afternoon and Wednesday Project Meeting' Gene Pages
content and display
