Difference between revisions of "Process page mock-ups"
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==[[Tissue morphogenesis]]== | ==[[Tissue morphogenesis]]== | ||
*[Embryonic mesendoderm development] | *[Embryonic mesendoderm development] | ||
+ | *[Muscle morphogenesis] | ||
==[[Organ development]]== | ==[[Organ development]]== | ||
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==[[Behavioral plasticity]]== | ==[[Behavioral plasticity]]== | ||
+ | *[Habituation] | ||
+ | *[Adaptation] | ||
==[[Locomotion]]== | ==[[Locomotion]]== | ||
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==[[Defecation]]== | ==[[Defecation]]== | ||
+ | *[Defecation cycle] | ||
==[[Ovulation]]== | ==[[Ovulation]]== | ||
*[Egg-laying] | *[Egg-laying] | ||
*[Egg-laying cycle]] | *[Egg-laying cycle]] | ||
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==[[Male Mating]]== | ==[[Male Mating]]== |
Revision as of 19:43, 24 July 2009
Contents
- 1 Notes for process pages
- 2 Processes in C. elegans
- 2.1 Cell division
- 2.2 Cell death
- 2.3 Dauer formation/arrest
- 2.4 L1 development
- 2.5 Tissue morphogenesis
- 2.6 Organ development
- 2.7 Germ line development
- 2.8 Spermatogenesis
- 2.9 Oogenesis
- 2.10 Sex determination
- 2.11 Dosage compensation
- 2.12 Male-specific development
- 2.13 Vulval development
- 2.14 Cell migration
- 2.15 Neuronal regeneration
- 2.16 Molting
- 2.17 Cell specification
- 2.18 Axis formation
- 2.19 Chemosensation
- 2.20 Mechanosensation
- 2.21 Synaptic transmission
- 2.22 Behavioral plasticity
- 2.23 Locomotion
- 2.24 Feeding
- 2.25 Defecation
- 2.26 Ovulation
- 2.27 Male Mating
- 2.28 Sleep
- 2.29 Pathogen Response
Notes for process pages
- Pathway databases
- BioCyc: Peter Karp, SRI, PathoLogic tools,
- KEGG:
- C. elegans specific db, Armand Leroi's, NMR-based metabolomic data using MetaShark for assigning enzyme classification
- WikiPathways: Alex Pico, Gladstone, GenMAPP Pathway Markup Language (GPML), PathVisio
- Reactome: Peter D'Eustachio, Lisa Matthews
- NEMAPATH: Makedonka Mitreva, nematode.net, nonelegans
- Visualization software
- Cytoscape
- GenMAPP
- PathVisio
Processes in C. elegans
Cell division
Cell death
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|
Dauer formation/arrest
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|
L1 development
- [L1 arrest]
Tissue morphogenesis
- [Embryonic mesendoderm development]
- [Muscle morphogenesis]
Organ development
|
Germ line development
Spermatogenesis
Oogenesis
Sex determination
Dosage compensation
Male-specific development
|
Vulval development
|
|
|
|
Cell migration
|
Neuronal regeneration
Molting
Cell specification
|
Axis formation
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|
Chemosensation
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|
Mechanosensation
Synaptic transmission
Behavioral plasticity
- [Habituation]
- [Adaptation]
Locomotion
|
Feeding
- [Pharyngeal pumping]
- [Foraging]
Defecation
- [Defecation cycle]
Ovulation
- [Egg-laying]
- [Egg-laying cycle]]
Male Mating
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|
|
Sleep
Pathogen Response
|