Difference between revisions of "Process page mock-ups"
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+ | [http://www.wormbase.org/wiki/index.php/Caltech_documentation back to Caltech SOPs] | ||
+ | =Notes for process pages= | ||
+ | *Pathway databases | ||
+ | **BioCyc: Peter Karp, SRI, PathoLogic tools, | ||
+ | **KEGG: | ||
+ | **C. elegans specific db, Armand Leroi's, NMR-based metabolomic data using MetaShark for assigning enzyme classification | ||
+ | **WikiPathways: Alex Pico, Gladstone, GenMAPP Pathway Markup Language (GPML), PathVisio | ||
+ | **Reactome: Peter D'Eustachio, Lisa Matthews | ||
+ | **NEMAPATH: Makedonka Mitreva, nematode.net, nonelegans | ||
+ | |||
+ | *Visualization software | ||
+ | **Cytoscape | ||
+ | **GenMAPP | ||
+ | **PathVisio | ||
+ | |||
=Processes in ''C. elegans''= | =Processes in ''C. elegans''= | ||
Revision as of 19:56, 20 June 2009
Contents
Notes for process pages
- Pathway databases
- BioCyc: Peter Karp, SRI, PathoLogic tools,
- KEGG:
- C. elegans specific db, Armand Leroi's, NMR-based metabolomic data using MetaShark for assigning enzyme classification
- WikiPathways: Alex Pico, Gladstone, GenMAPP Pathway Markup Language (GPML), PathVisio
- Reactome: Peter D'Eustachio, Lisa Matthews
- NEMAPATH: Makedonka Mitreva, nematode.net, nonelegans
- Visualization software
- Cytoscape
- GenMAPP
- PathVisio
Processes in C. elegans
Cell death
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Dauer arrest
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Vulval development
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Neuronal regeneration
Neuronal migration
Molting
Cell specification
Axis formation
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Chemosensation
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Mechanosensation
Behavioral plasticity
Locomotion
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