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| Line 46: |
Line 46: |
| | ==[[Locomotion]]== | | ==[[Locomotion]]== |
| | [Pirouettes] [Foraging] [Taxis] | | [Pirouettes] [Foraging] [Taxis] |
| − |
| |
| − | ----
| |
| − |
| |
| − | =Cell death=
| |
| − | [Programmed cell death: Developmental]
| |
| − | [Programmed cell death: Germ line]
| |
| − | [Necrosis]
| |
| − | [Autophagy]
| |
| − |
| |
| − |
| |
| − | ==Programmed Cell Death: Developmental==
| |
| − | '''[http://www.wormbook.org/chapters/www_programcelldeath/programcelldeath.html Developmental Cell Death in ''C. elegans'']'''
| |
| − |
| |
| − | [[image:Pcdfig2_s.png]]
| |
| − |
| |
| − | ----
| |
| − |
| |
| − | <h3>Steps and processes</h3>
| |
| − | <h4>[[Specification]]</h4>
| |
| − | "...a cell is instructed to undergo programmed cell death..."
| |
| − | **''[http://www.wormbase.org/db/gene/gene?name=WBGene00001324;class=Gene eor-1]''
| |
| − | **''[http://www.wormbase.org/db/gene/gene?name=WBGene00001325;class=Gene eor-2]''
| |
| − | **''[http://www.wormbase.org/db/gene/gene?name=WBGene00006604;class=Gene tra-1]''
| |
| − | **''[http://www.wormbase.org/db/gene/gene?name=WBGene00001949;class=Gene hlh-2]''
| |
| − | **''[http://www.wormbase.org/db/gene/gene?name=WBGene00001950;class=Gene hlh-3]''
| |
| − | **''[http://www.wormbase.org/db/gene/gene?name=WBGene00000469;class=Gene ces-2]''
| |
| − | **''[http://www.wormbase.org/db/gene/gene?name=WBGene00000468;class=Gene ces-1]''
| |
| − |
| |
| − | <h4>[[Killing Phase]]</h4>
| |
| − | "...the apoptotic program is activated in the cell instructed to die..."
| |
| − |
| |
| − | <h4>[[Execution Phase]]</h4>
| |
| − | "...cells are dismantled and subsequently engulfed by neighboring cells..."
| |
| − |
| |
| − | *[[DNA Degradation Pathway]]
| |
| − | *[[Corpse Engulfment Pathway]]
| |
| − |
| |
| − | <h3>Cells/Tissues</h3>
| |
| − | [http://www.wormbase.org/db/misc/etree?name=cells_that_die;class=Cell_group;view=expand cells that die]
| |
| − | *[http://www.wormbase.org/db/misc/etree?name=embryonic_death;class=Cell_group;view=expand embryonic death]
| |
| − | *post-embryonic death
| |
| − | **[http://www.wormbase.org/db/misc/etree?name=death_in_both_sexes;class=Cell_group;view=expand death in both sexes]
| |
| − | **[http://www.wormbase.org/db/misc/etree?name=death_in_herms;class=Cell_group;view=expand death in hermaphrodites]
| |
| − | **[http://www.wormbase.org/db/misc/etree?name=death_in_males;class=Cell_group;view=expand death in males]
| |
| − | ''map onto animal/link to anatomy pages''
| |
| − |
| |
| − |
| |
| − | <h3>Cell programs </h3>
| |
| − | *division
| |
| − | *differentiation
| |
| − | *[[death]]
| |
| − | *division in male
| |
| − | *differentiation in hermaphrodite
| |
| − | *differentiation in male
| |
| − | *death in hermaphrodite
| |
| − | *division in hermaphrodite
| |
| − |
| |
| − | <h3>Pathways</h3>
| |
| − | *'''[http://www.reactome.org reactome]'''
| |
| − | *'''[http://www.biocyc.org biocyc.org pathway tools]'''
| |
| − |
| |
| − |
| |
| − |
| |
| − | ==Programmed Cell Death: Germ line==
| |
| − | '''[http://www.wormbook.org/chapters/www_germlinesurvival/germlinesurvival.html Germline Cell Death in ''C. elegans'']'''
| |
| − |
| |
| − |
| |
| − | ----
| |
Processes in C. elegans
[Programmed cell death: Developmental]
[Programmed cell death: Germ line]
[Necrosis]
[Autophagy]
[Regulation of dauer arrest]
[Dauer morphological changes]
[Dauer metabolism]
[Neuronal processes in dauer arrest]
[Steroids/hormones]
[Quiescence]
[Generation of VPC's]
[Vulval Precursor Patterning]
[Generation of the adult]
[Anchor cell invasion]
[Morphogenesis of the vulva]
[Generation of the anchor cell: AC/UV decision]
[Uterine patterning: pi cell induction]
[Uterine patterning: uv1 induction]
[Patterning of adult cell types: 1° lineage]
[Patterning of adult cell types: Polarity of 2° lineage]
[Asymmetric cell division] [Establishing polarity: A/P axis] [Establishing polarity: D/V axis] [Establishing polarity; L/R Axis] [Maintaining polarity]
[Chemotaxis] [Oxygen sensing] [Mating] [Integrating signals]
[Pirouettes] [Foraging] [Taxis]
