Postgres Query
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Jump to navigationJump to searchQuery Variation-Phenotype Postgres curation tables from this site:
Some Queries from Juancarlos:
1) Find number of distinct genes associated with a phenotype via allele (I think it's just allele):
paste :
SELECT COUNT (DISTINCT app_wbgene) FROM app_wbgene;
and click ``Pg !
2) If you want to see them, paste :
SELECT DISTINCT app_wbgene FROM app_wbgene;
3) Find objects where the allele status is populated with a space
SELECT * FROM app_tempname WHERE joinkey IN (SELECT joinkey FROM app_allele_status
WHERE app_allele_status IS NOT NULL AND app_allele_status != );
4) Find objects that have an allele status value
SELECT * FROM app_tempname WHERE joinkey IN (SELECT joinkey FROM app_allele_status);
5) Find lines where anatomy term field started with a space
SELECT * FROM app_anat_term WHERE app_anat_term ~ ' ';
