|
|
| (9 intermediate revisions by 2 users not shown) |
| Line 1: |
Line 1: |
| − | [http://www.wormbase.org/wiki/index.php/Caltech_documentation ''back'']
| |
| | | | |
| − | Query curation tables from this site:
| |
| − |
| |
| − | [http://tazendra.caltech.edu/~postgres/cgi-bin/referenceform.cgi Postgres query page]
| |
| − |
| |
| − | Some Queries from Juancarlos:
| |
| − |
| |
| − | 1) Find number of distinct genes associated with a phenotype via allele (I think it's just allele):
| |
| − |
| |
| − | paste :
| |
| − |
| |
| − | SELECT COUNT (DISTINCT app_wbgene) FROM app_wbgene;
| |
| − |
| |
| − | and click ``Pg !
| |
| − |
| |
| − | 2) If you want to see them, paste :
| |
| − |
| |
| − | SELECT DISTINCT app_wbgene FROM app_wbgene;
| |
| − |
| |
| − | 3) Find objects where the allele status is populated with a space
| |
| − |
| |
| − | SELECT * FROM app_tempname WHERE joinkey IN (SELECT joinkey FROM app_allele_status
| |
| − |
| |
| − | WHERE app_allele_status IS NOT NULL AND app_allele_status != '');''
| |
| − |
| |
| − | 4) Find objects that have an allele status value
| |
| − |
| |
| − | SELECT * FROM app_tempname WHERE joinkey IN (SELECT joinkey FROM app_allele_status);
| |
| − |
| |
| − | 5) Find lines where anatomy term field started with a space
| |
| − |
| |
| − | SELECT * FROM app_anat_term WHERE app_anat_term ~ ' ';
| |
