Pipeline for identifying papers with drugs

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  • Initial plan was to use the 'molecules' list to identify papers with drugs, output was overloaded with papers with biomolecules, does not work for drugs.
  • Building the drug lexicon:

The following lists were used:

http://antibiotics.toku-e.com/antimicrobial

  • Antiparasitic drugs--Aldicarb, Ivermectin, Levamisole
  • Anti-depressants, anti-depressants, anticonvulsants, anti-psychotic and psycho-active drugs:

http://en.wikipedia.org/wiki/List_of_antidepressants

http://www.nimh.nih.gov/health/publications/mental-health-medications/alphabetical-list-of-medications.shtml

http://en.wikipedia.org/wiki/Psychoactive_drug

(Table under the heading Affected neurotransmitter systems, capture columns 'Classification' and 'Examples')

http://www.surgeryencyclopedia.com/Fi-La/Immunosuppressant-Drugs.html

  • For the purpose of the lexicon:Use generic name for drug name, trade name will be used as synonymn.

Exceptions: --Skip pure numbers Resveratrol, Gingko biloba