Difference between revisions of "Phenotype micropublications"
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Add -above 'Optional' | Add -above 'Optional' | ||
*Disclaimer -> mandatory checkbox like in the Expression micropublication form: I declare to the best of my knowledge that the experiment is reproducible. | *Disclaimer -> mandatory checkbox like in the Expression micropublication form: I declare to the best of my knowledge that the experiment is reproducible. | ||
+ | |||
+ | ==Model Changes== | ||
+ | |||
+ | ===RNAi=== | ||
+ | |||
+ | in ?RNAi class add: | ||
+ | Supporting_data Picture ?Picture XREF RNAi | ||
+ | |||
+ | in ?Picture class add | ||
+ | RNAi ?RNAi XREF Picture | ||
+ | |||
+ | ===Phenotype=== | ||
+ | Picture ?Picture XREF Phenotype | ||
==Changes to the OAs== | ==Changes to the OAs== | ||
+ | |||
+ | ===RNAi OA=== | ||
+ | Add a Picture field in tab 4 between 'History name' and 'Movie' | ||
===Phenotype OA=== | ===Phenotype OA=== | ||
Add a Picture field | Add a Picture field | ||
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− | |||
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==Title?== | ==Title?== |
Revision as of 16:53, 23 August 2016
For Phenotype-micropublications submissions we will modify the existing Allele-phenotype submission form. The underlying CGI will remain the same but the Allele-phenotype and the Phenotype-micropublications form will have 2 separate displays.
Contents
Changes to the form
Changes to the current Allele-phenotype form located here: http://www.wormbase.org/submissions/phenotype.cgi: Expression micropublication form here: http://mangolassi.caltech.edu/~azurebrd/cgi-bin/forms/expr_micropub.cgi
Remove:
- PubMedID -submissions are novel data, do not have a paper attached. Submissions will get their own WBPaperID
- Click here to review your publications and see which are in need of phenotype curation -this field not necessary in the micropublication form
Add -below 'Your e-mail address' field:
- co-authors -> autocomplete on people
- Laboratory -> autocomplete on labs -> mandatory
- Funding -> free text -> mandatory
- Species -> autocomplete on species?
- Choose an image -> Browse button, only jpg accepted -> mandatory
- Description -> big text (small box that becomes big upon clicking)
Change:
- Genetic perturbation(s) in -> Perturbation(s)
- this text: 'PLEASE NOTE: All genetic perturbations above will be annotated to all phenotypes entered below. For separate perturbation-phenotype annotations, please perform separate submissions, or use the WormBase Phenotype Worksheet (linked above).'
in this: 'PLEASE NOTE: All perturbations above will be annotated to all phenotypes entered below. For separate perturbation-phenotype annotations, please perform separate submissions, or use the WormBase Phenotype Worksheet (linked above).'
Add -below 'Transgene' field: Molecule -> autocomplete on molecules
Add -above 'Optional'
- Disclaimer -> mandatory checkbox like in the Expression micropublication form: I declare to the best of my knowledge that the experiment is reproducible.
Model Changes
RNAi
in ?RNAi class add: Supporting_data Picture ?Picture XREF RNAi
in ?Picture class add RNAi ?RNAi XREF Picture
Phenotype
Picture ?Picture XREF Phenotype
Changes to the OAs
RNAi OA
Add a Picture field in tab 4 between 'History name' and 'Movie'
Phenotype OA
Add a Picture field