Difference between revisions of "Paper Pipeline - To Do List"

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#[[Correct invalid PMIDs and their associated paper types - Kimberly]]
+
==Short-Term==
#[[Write up a summary of the weekly checking script - Kimberly and Juancarlos]]
+
 
#[[Add a limited number of new paper types to allow for single type classification - Kimberly and Juancarlos]]
+
'''Correct invalid PMIDs and their associated paper types - Kimberly'''
#[[Discuss timeline and implications for changing the Paper models to allow for multiple types - WormBase]]
+
*How often do we want to check for invalid PMIDs? 
#[[Decide if, and how, we want to run a script that cross-checks PubMed and postgres data - Caltech]]
+
*PubMed maintains a file of obsolete PMIDs on their ftp site.
#[[Finish documentation of current paper type mappings - PubMed vs postgres vs Journal - for informing SVMs and Textpresso searches - Caltech]]
+
 
 +
'''Write up a summary of the weekly checking script - Kimberly and Juancarlos'''
 +
 
 +
'''Add a limited number of new paper types to allow for single type classification - Kimberly and Juancarlos'''
 +
 
 +
'''Finish documentation of current paper type mappings - PubMed vs postgres vs Journal - for informing SVMs and Textpresso searches - Caltech'''
 +
 
 +
'''Decide how to handle upload of Genetics papers''' - Karen, Juancarlos, Kimberly
 +
 
 +
==Long-Term==
 +
 
 +
'''Discuss timeline and implications for changing the Paper models to allow for multiple types - WormBase'''
 +
 
 +
'''Decide if, and how, we want to run a script that cross-checks PubMed and postgres data - Caltech'''

Revision as of 11:16, 21 July 2009

Short-Term

Correct invalid PMIDs and their associated paper types - Kimberly

  • How often do we want to check for invalid PMIDs?
  • PubMed maintains a file of obsolete PMIDs on their ftp site.

Write up a summary of the weekly checking script - Kimberly and Juancarlos

Add a limited number of new paper types to allow for single type classification - Kimberly and Juancarlos

Finish documentation of current paper type mappings - PubMed vs postgres vs Journal - for informing SVMs and Textpresso searches - Caltech

Decide how to handle upload of Genetics papers - Karen, Juancarlos, Kimberly

Long-Term

Discuss timeline and implications for changing the Paper models to allow for multiple types - WormBase

Decide if, and how, we want to run a script that cross-checks PubMed and postgres data - Caltech