Difference between revisions of "Paper ID conversion CGI"

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[[File:Paper_ID_Conversion_CGI_example_entries_3-11-2015.png]]
 
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Once the user has clicked on the "ConvertPaperIdentifiers" button at the bottom of the form, a user will be presented with a results table. Here is the results table (with all four columns) for the example WBPaper ID example list above:
 
 
 
 
 
 
  
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[[File:Paper_ID_Conversion_CGI_example_output_3-11-2015.png]]
  
 
= Code Documentation =
 
= Code Documentation =
  
 
Chris & Juancarlos will add
 
Chris & Juancarlos will add

Revision as of 20:44, 11 March 2015

Overview

The Paper ID Conversion CGI is an online tool for curators to convert paper IDs in bulk to other IDs. The tool also may output paper titles from a list of input paper IDs. The tool accepts WormBase Paper IDs (e.g. WBPaper00012345), PubMed IDs (pmid12345678) or digital object identifiers (DOIs). The form may be found here:

http://tazendra.caltech.edu/~azurebrd/cgi-bin/forms/generic.cgi?action=PapIdToWBPaper

The CGI looks like this:

Paper ID conversion CGI 3-11-2015.png

A user must specify which identifier types will be used as input to the form (only one ID type can be processed at a time). The IDs may then be pasted into the search box. WBPaper IDs may have the "WBPaper" prefix but do not need it. Likewise, the PubMed IDs may be entered with a "pmid" prefix (no colon) or simply as the ID number alone. DOIs need to be entered in full. A user may then specify which output data they would like to see, including WBPaper ID, PubMed ID (pmid), DOI and/or paper title. For example, a series of WBPaper IDs may be entered like this:

Paper ID Conversion CGI example entries 3-11-2015.png

Once the user has clicked on the "ConvertPaperIdentifiers" button at the bottom of the form, a user will be presented with a results table. Here is the results table (with all four columns) for the example WBPaper ID example list above:

Paper ID Conversion CGI example output 3-11-2015.png

Code Documentation

Chris & Juancarlos will add