Difference between revisions of "Ontology Annotator"

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#Simple pop-up to remind curator to 'Add newline' before curating, could spring up when two or more fields are filled in (submitted by Ranjana--I still find it difficult to remember to start a new-line and realize when I finish an entire line of curation, that it has gone nowhere). Yes, I do the same thing all the time (Kimberly).  Maybe if there are no existing annotations, a new line could appear automatically.  When there are existing annotations, I usually check to see if there is one that I can duplicate to get started with annotations.
 
#Simple pop-up to remind curator to 'Add newline' before curating, could spring up when two or more fields are filled in (submitted by Ranjana--I still find it difficult to remember to start a new-line and realize when I finish an entire line of curation, that it has gone nowhere). Yes, I do the same thing all the time (Kimberly).  Maybe if there are no existing annotations, a new line could appear automatically.  When there are existing annotations, I usually check to see if there is one that I can duplicate to get started with annotations.
 
#Include dependencies wherever possible.  For example, if making an IMP annotation for a given gene, have a gene-specific drop down menu of alleles or RNAi experiments for the WITH column.  Or, if making an IGI annotation for the paper, have a drop down list of all genes mentioned in the paepr.  Similarly, when entering a GO term, have the ontology (P, F, or C) get entered automatically. (From Curation Interface Meeting)
 
#Include dependencies wherever possible.  For example, if making an IMP annotation for a given gene, have a gene-specific drop down menu of alleles or RNAi experiments for the WITH column.  Or, if making an IGI annotation for the paper, have a drop down list of all genes mentioned in the paepr.  Similarly, when entering a GO term, have the ontology (P, F, or C) get entered automatically. (From Curation Interface Meeting)
 +
#Free text fields truncate text while copy-pasting any pdf text that contains symbols (eg: degree symbol) 
  
 
Back to [[Caltech documentation]]
 
Back to [[Caltech documentation]]

Revision as of 16:21, 4 February 2010

Wish List and Bug Reports, Jan-Feb 2010

  1. How to lock-down database during information transfer to and from postgres still remains. For now, lock-down has been disabled.
  2. Simple pop-up to remind curator to 'Add newline' before curating, could spring up when two or more fields are filled in (submitted by Ranjana--I still find it difficult to remember to start a new-line and realize when I finish an entire line of curation, that it has gone nowhere). Yes, I do the same thing all the time (Kimberly). Maybe if there are no existing annotations, a new line could appear automatically. When there are existing annotations, I usually check to see if there is one that I can duplicate to get started with annotations.
  3. Include dependencies wherever possible. For example, if making an IMP annotation for a given gene, have a gene-specific drop down menu of alleles or RNAi experiments for the WITH column. Or, if making an IGI annotation for the paper, have a drop down list of all genes mentioned in the paepr. Similarly, when entering a GO term, have the ontology (P, F, or C) get entered automatically. (From Curation Interface Meeting)
  4. Free text fields truncate text while copy-pasting any pdf text that contains symbols (eg: degree symbol)

Back to Caltech documentation