OA for disease term
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Revision as of 18:36, 27 February 2014 by Rkishore (talk | contribs) (→Fields for the Disease Term OA)
In cases where there is no elegans gene to attach disease data (eg., Huntington's disease), data will be attached to the DO-term.
DO term model
?DO_term Name UNIQUE ?Text Status UNIQUE Valid Obsolete Alternate_id ?Text Definition UNIQUE ?Text Worm_disease_model ?Text ?Species #Evidence //added Jan 2014, for WS242 Comment Text Synonymn Broad ?Text Exact ?Text Narrow ?Text Related ?Text Parent Is_a ?DO_term XREF Is Child Is ?DO_term XREF Is_a DB_info Database ?Database ?Database_field Text Type GOLD Gram_negative_bacterial_infectious_disease Gram_positive_bacterial_infectious_disease Sexually_transmitted_infectious_disease Tick_borne_infectious_disease Zoonotic_infectious_disease Attribute_of Gene_by_biology ?Gene XREF Experimental_model Gene_by_orthology ?Gene XREF Potential_model Phenotype ?Phenotype XREF DO_term WBProcess ?WBProcess XREF DO_term Reference ?Paper XREF DO_term Version UNIQUE Text
Fields for the Disease Term OA
Order | Name | Type | Required? | Shows as | acedb tag | |
---|---|---|---|---|---|---|
1 | DO term | Autocomplete obo | required | Huntington's disease (DOID:12858) | ?DO_term | |
2 | Curator | Autocomplete dropdown | required | Ranjana Kishore | Curator_confirmed | |
3 | Curator History | script populates | n/a | 56 | n/a | |
4 | Species | Autocomplete dropdown | required | Homo sapien | ?Species | |
5 | Worm Model Description | Big text box | required | The C. elegans model for.. | Worm_model_description | |
6 | Paper | Autocomplete obo, multivalue | required | WBPaper00041363 | Paper_evidence | |
7 | Date | Autocompleted for new annotation editable for old |
required | 2014-02-27 | Date_last_updated | |
8 | Comment | Free text | optional | Waiting for DO_term.. | n/a | |
9 | PGID | Script populates | n/a | 48 | n/a |