Difference between revisions of "OA for disease term"
From WormBaseWiki
Jump to navigationJump to searchLine 47: | Line 47: | ||
|2 || Curator || Autocomplete dropdown || '''required'''|| || | |2 || Curator || Autocomplete dropdown || '''required'''|| || | ||
|- | |- | ||
− | |3 || Curator | + | |3 || Curator History || script populates || n/a || || |
|- | |- | ||
|4 || Species || Autocomplete dropdown || '''required''' || || | |4 || Species || Autocomplete dropdown || '''required''' || || | ||
|- | |- | ||
− | |5 || Worm | + | |5 || Worm Model Description || Big text box ||'''required''' || || |
|- | |- | ||
|6 || Paper || Autocomplete obo, <br/>multivalue || '''required'''|| ||WBPaper00041363|| | |6 || Paper || Autocomplete obo, <br/>multivalue || '''required'''|| ||WBPaper00041363|| |
Revision as of 18:18, 27 February 2014
In cases where there is no elegans gene to attach disease data (eg., Huntington's disease), data will be attached to the DO-term.
DO term model
?DO_term Name UNIQUE ?Text Status UNIQUE Valid Obsolete Alternate_id ?Text Definition UNIQUE ?Text Worm_disease_model ?Text ?Species #Evidence //added Jan 2014, for WS242 Comment Text Synonymn Broad ?Text Exact ?Text Narrow ?Text Related ?Text Parent Is_a ?DO_term XREF Is Child Is ?DO_term XREF Is_a DB_info Database ?Database ?Database_field Text Type GOLD Gram_negative_bacterial_infectious_disease Gram_positive_bacterial_infectious_disease Sexually_transmitted_infectious_disease Tick_borne_infectious_disease Zoonotic_infectious_disease Attribute_of Gene_by_biology ?Gene XREF Experimental_model Gene_by_orthology ?Gene XREF Potential_model Phenotype ?Phenotype XREF DO_term WBProcess ?WBProcess XREF DO_term Reference ?Paper XREF DO_term Version UNIQUE Text
Fields for the Disease Term OA
Order | Name | Type | Required? | Equivalent acedb tag | Example | |
---|---|---|---|---|---|---|
1 | DO term | Autocomplete obo | required | |||
2 | Curator | Autocomplete dropdown | required | |||
3 | Curator History | script populates | n/a | |||
4 | Species | Autocomplete dropdown | required | |||
5 | Worm Model Description | Big text box | required | |||
6 | Paper | Autocomplete obo, multivalue |
required | WBPaper00041363 | ||
7 | Date | Autocompleted for new annotation editable for old |
required | |||
8 | Comment | Free text | optional | |||
9 | PGID | Script populates | n/a |