OA and scripts for disease data
OA for disease data in WormBase:
Field 1 Name: WBGene Behavior of field: Autocomplete obo Source: WBGene obo Similar to: WBGene in the GO OA or concise descrips OA As one starts typing locus name, eg, lin-10 or cosmid name, eg., C09H6 script autocompletes and fills in WBGene ID.
Field 2 Name: Experimental model for Behavior:Autocomplete obo Obo file to be used: DO_term obo Source: https://diseaseontology.svn.sourceforge.net/svnroot/diseaseontology/trunk/HumanDO.obo Similar to: GO term field in the GO OA.
For example, curator starts typing 'Alz', picks 'Alzheimer's disease' from the drop-down and script populates field with 'Alzheimer's disease (DOID:10652); similar to GO term OA in the GO OA. Updating: How do we update this obo file, how frequently do other obo files get updated?
Field 3 Name: Species Behavior: Auto-complete drop-down with ready values Similar to: Project field in the GO OA Current values: Homo sapiens
Field 4 Name: Disease_relevance Behavior: This is the Human_disease_relevance
Field 4 Name: Database Behavior: Free text, multiple values comma-separated