November 25, 2009 - Sequence Curation Flags

From WormBaseWiki
Jump to navigationJump to search

Back to Caltech documentation

Call Information

4:30pm GMT | 11:30am EST | 10:30am CST | 8:30am PST

US: 1-877-384-2311, +1-480-629-1629

UK: 0800-358-3475, +44-207-154-0025

Canada: 1-866-243-1291

participant access code: 822114

Location: wherever you are

Participants

Review sequence-related first pass flags

http://tazendra.caltech.edu/~postgres/cgi-bin/curator_first_pass.cgi

Pipelines and options for flagging

SVMs

Textpresso - pattern matching, category searches

Author flags

Current status of each flag

  1. gene symbol
    • Currently being combined with seqchange.
  1. mapping data
  1. sequence features
  1. mass spectrometry
  1. structure correction
  1. sequence change
  1. new SNPs
  1. new mutant (alleles)

Minutes, Action Items