Difference between revisions of "Noctua model curation tracking table"

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Revision as of 20:02, 28 December 2017

Curator Broad Category Pathway Noctua Model Title GO Term(s), IDs Module(s) Noctua Model URL Model Status To Do
Kimberly Apoptosis Apoptotic process involved in development - C. elegans NSM sister cell death http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001432 Development
Kimberly Axon regeneration Rac module; upstream of JNK-MAPK C. elegans regulation of axon regeneration http://noctua.berkeleybop.org/editor/graph/gomodel:591f58ab00000003 Development
Kimberly Dosage Compensation C. elegans X chromosome dosage compensation http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000147 Development
EGF Signaling
FGF Signaling
Kimberly Distal tip cell migration Glycosylation The directed migration of gonadal distal tip cells in Caenorhabditis elegans requires NGAT-1, a ß1,4-N-acetylgalactosaminyltransferase enzyme http://noctua.berkeleybop.org/editor/graph/gomodel:5993df9e00000138 Development
Kimberly Dauer GPCR Signaling Two chemoreceptors mediate developmental effects of dauer pheromone in C. elegans. http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000454 Development
Jae, Jane, Kimberly Egg laying GPCR Signaling GRK-2 egg laying regulation JM http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000287 Development Finish up annotations for other genes in the paper
Kimberly Innate immune response GPCR Signaling The DAF-16/FOXO transcription factor functions as a regulator of epidermal innate immunity. http://noctua.berkeleybop.org/editor/graph/gomodel:5993df9e00000158 Development
Kimberly Innate immune response GPCR Signaling and MAPK signaling C_elegans_defense_response_to_fungus http://noctua.berkeleybop.org/editor/graph/gomodel:564622cc00000003 Development
Kimberly Heterochronic pathway Control of C. elegans larval developmental timing - the heterochronic pathway http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000246 Development
Kimberly Insulin Signaling Signaling - C. elegans insulin receptor signaling http://noctua.berkeleybop.org/editor/graph/gomodel:5667fdd400000696 Development
Kimberly Germ line stem cell maintenance Notch Signaling C. elegans germline stem cell maintenance - Notch pathway Notch signaling pathway (GO:0007219), positive regulation of stem cell population maintenance (GO:1902459), positive regulation of stem cell proliferation (GO:2000648) http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001750 Development
Kimberly Neuronal morphogenesis - AFD thermosensory neuron Receptor guanylyl cyclase Cellular Component Organization or Biogenesis - C. elegans Glial Control of Neuron Receptor Ending Shape http://noctua.berkeleybop.org/editor/graph/gomodel:5716c41300000192 Development
Kimberly Olfactory behavior Developmental programming modulates olfactory behavior in C. elegans via endogenous RNAi pathways. (PMID:27351255) http://noctua.berkeleybop.org/editor/graph/gomodel:59237a3c00000026 Development
Kimberly Striated muscle mitochondrial patterning Receptor tyrosine phosphatase The secreted MSP domain of C. elegans VAPB homolog VPR-1 patterns the adult striated muscle mitochondrial reticulum via SMN-1 http://noctua.berkeleybop.org/editor/graph/gomodel:5970219a00000566 Development
Kimberly Germ line stem cell maintenance TGFbeta Signaling Linking the environment, DAF-7/TGFβ signaling and LAG-2/DSL ligand expression in the germline stem cell niche http://noctua.berkeleybop.org/editor/graph/gomodel:59bee34700000074 Development
Kimberly DA/DB motor neuron axon outgrowth Wnt Signaling The ENU-3 protein family members function in the Wnt pathway parallel to UNC-6/Netrin to promote motor neuron axon outgrowth in C. elegans. http://noctua.berkeleybop.org/editor/graph/gomodel:598826eb00000296 Development
Chris Q neuroblast descendant migration Wnt Signaling Canonical Wnt signaling in C. elegans - QL neuroblast descendant migration canonical Wnt signaling pathway (GO:0060070), cell migration (GO:0016477), transcription from RNA polymerase II promoter (GO:0006366) http://noctua.berkeleybop.org/editor/graph/gomodel:595a9ee700000584 Development