Difference between revisions of "Noctua model curation tracking table"
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! Noctua Model Title | ! Noctua Model Title | ||
! GO Term(s), IDs | ! GO Term(s), IDs | ||
+ | ! Module(s) | ||
! Noctua Model URL | ! Noctua Model URL | ||
! Model Status | ! Model Status | ||
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| Apoptotic process involved in development - C. elegans NSM sister cell death | | Apoptotic process involved in development - C. elegans NSM sister cell death | ||
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| http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001432 | | http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001432 | ||
| Development | | Development | ||
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| C. elegans X chromosome dosage compensation | | C. elegans X chromosome dosage compensation | ||
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| http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000147 | | http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000147 | ||
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| EGF Signaling | | EGF Signaling | ||
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| FGF Signaling | | FGF Signaling | ||
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| The directed migration of gonadal distal tip cells in Caenorhabditis elegans requires NGAT-1, a ß1,4-N-acetylgalactosaminyltransferase enzyme | | The directed migration of gonadal distal tip cells in Caenorhabditis elegans requires NGAT-1, a ß1,4-N-acetylgalactosaminyltransferase enzyme | ||
| | | | ||
+ | | | ||
| http://noctua.berkeleybop.org/editor/graph/gomodel:5993df9e00000138 | | http://noctua.berkeleybop.org/editor/graph/gomodel:5993df9e00000138 | ||
| Development | | Development | ||
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| Two chemoreceptors mediate developmental effects of dauer pheromone in C. elegans. | | Two chemoreceptors mediate developmental effects of dauer pheromone in C. elegans. | ||
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+ | | | ||
| http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000454 | | http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000454 | ||
| Development | | Development | ||
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| GRK-2 egg laying regulation JM | | GRK-2 egg laying regulation JM | ||
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+ | | | ||
| http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000287 | | http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000287 | ||
| Development | | Development | ||
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| The DAF-16/FOXO transcription factor functions as a regulator of epidermal innate immunity. | | The DAF-16/FOXO transcription factor functions as a regulator of epidermal innate immunity. | ||
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+ | | | ||
| http://noctua.berkeleybop.org/editor/graph/gomodel:5993df9e00000158 | | http://noctua.berkeleybop.org/editor/graph/gomodel:5993df9e00000158 | ||
| Development | | Development | ||
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| Control of C. elegans larval developmental timing - the heterochronic pathway | | Control of C. elegans larval developmental timing - the heterochronic pathway | ||
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| http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000246 | | http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000246 | ||
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| Insulin Signaling | | Insulin Signaling | ||
| Signaling - C. elegans insulin receptor signaling | | Signaling - C. elegans insulin receptor signaling | ||
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| http://noctua.berkeleybop.org/editor/graph/gomodel:5667fdd400000696 | | http://noctua.berkeleybop.org/editor/graph/gomodel:5667fdd400000696 | ||
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| C. elegans germline stem cell maintenance - Notch pathway | | C. elegans germline stem cell maintenance - Notch pathway | ||
| Notch signaling pathway (GO:0007219), positive regulation of stem cell population maintenance (GO:1902459), positive regulation of stem cell proliferation (GO:2000648) | | Notch signaling pathway (GO:0007219), positive regulation of stem cell population maintenance (GO:1902459), positive regulation of stem cell proliferation (GO:2000648) | ||
+ | | | ||
| http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001750 | | http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001750 | ||
| Development | | Development | ||
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| Germ line stem cell maintenance | | Germ line stem cell maintenance | ||
| TGFbeta Signaling | | TGFbeta Signaling | ||
− | | Linking the environment, DAF-7/TGFβ signaling and LAG-2/DSL ligand expression in the germline stem cell niche | + | | Linking the environment, DAF-7/TGFβ signaling and LAG-2/DSL ligand expression in the germline stem cell niche |
+ | | | ||
| | | | ||
| http://noctua.berkeleybop.org/editor/graph/gomodel:59bee34700000074 | | http://noctua.berkeleybop.org/editor/graph/gomodel:59bee34700000074 | ||
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| The ENU-3 protein family members function in the Wnt pathway parallel to UNC-6/Netrin to promote motor neuron axon outgrowth in C. elegans. | | The ENU-3 protein family members function in the Wnt pathway parallel to UNC-6/Netrin to promote motor neuron axon outgrowth in C. elegans. | ||
| | | | ||
+ | | | ||
| http://noctua.berkeleybop.org/editor/graph/gomodel:598826eb00000296 | | http://noctua.berkeleybop.org/editor/graph/gomodel:598826eb00000296 | ||
| Development | | Development | ||
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| Wnt Signaling | | Wnt Signaling | ||
| Canonical Wnt signaling in C. elegans - QL neuroblast descendant migration | | Canonical Wnt signaling in C. elegans - QL neuroblast descendant migration | ||
+ | | | ||
| canonical Wnt signaling pathway (GO:0060070), cell migration (GO:0016477), transcription from RNA polymerase II promoter (GO:0006366) | | canonical Wnt signaling pathway (GO:0060070), cell migration (GO:0016477), transcription from RNA polymerase II promoter (GO:0006366) | ||
| http://noctua.berkeleybop.org/editor/graph/gomodel:595a9ee700000584 | | http://noctua.berkeleybop.org/editor/graph/gomodel:595a9ee700000584 |
Revision as of 18:18, 28 December 2017
Curator | Broad Category | Pathway | Noctua Model Title | GO Term(s), IDs | Module(s) | Noctua Model URL | Model Status | To Do |
---|---|---|---|---|---|---|---|---|
Kimberly | Apoptosis | Apoptotic process involved in development - C. elegans NSM sister cell death | http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001432 | Development | ||||
Kimberly | Dosage Compensation | C. elegans X chromosome dosage compensation | http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000147 | Development | ||||
EGF Signaling | ||||||||
FGF Signaling | ||||||||
Kimberly | Distal tip cell migration | Glycosylation | The directed migration of gonadal distal tip cells in Caenorhabditis elegans requires NGAT-1, a ß1,4-N-acetylgalactosaminyltransferase enzyme | http://noctua.berkeleybop.org/editor/graph/gomodel:5993df9e00000138 | Development | |||
Kimberly | Dauer | GPCR Signaling | Two chemoreceptors mediate developmental effects of dauer pheromone in C. elegans. | http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000454 | Development | |||
Jae, Jane, Kimberly | Egg laying | GPCR Signaling | GRK-2 egg laying regulation JM | http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000287 | Development | Finish up annotations for other genes in the paper | ||
Kimberly | Innate immunity | GPCR Signaling | The DAF-16/FOXO transcription factor functions as a regulator of epidermal innate immunity. | http://noctua.berkeleybop.org/editor/graph/gomodel:5993df9e00000158 | Development | |||
Kimberly | Heterochronic pathway | Control of C. elegans larval developmental timing - the heterochronic pathway | http://noctua.berkeleybop.org/editor/graph/gomodel:59dc728000000246 | Development | ||||
Kimberly | Insulin Signaling | Signaling - C. elegans insulin receptor signaling | http://noctua.berkeleybop.org/editor/graph/gomodel:5667fdd400000696 | Development | ||||
Kimberly | Germ line stem cell maintenance | Notch Signaling | C. elegans germline stem cell maintenance - Notch pathway | Notch signaling pathway (GO:0007219), positive regulation of stem cell population maintenance (GO:1902459), positive regulation of stem cell proliferation (GO:2000648) | http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001750 | Development | ||
Kimberly | Germ line stem cell maintenance | TGFbeta Signaling | Linking the environment, DAF-7/TGFβ signaling and LAG-2/DSL ligand expression in the germline stem cell niche | http://noctua.berkeleybop.org/editor/graph/gomodel:59bee34700000074 | Development | |||
Kimberly | DA/DB motor neuron axon outgrowth | Wnt Signaling | The ENU-3 protein family members function in the Wnt pathway parallel to UNC-6/Netrin to promote motor neuron axon outgrowth in C. elegans. | http://noctua.berkeleybop.org/editor/graph/gomodel:598826eb00000296 | Development | |||
Chris | Q neuroblast descendant migration | Wnt Signaling | Canonical Wnt signaling in C. elegans - QL neuroblast descendant migration | canonical Wnt signaling pathway (GO:0060070), cell migration (GO:0016477), transcription from RNA polymerase II promoter (GO:0006366) | http://noctua.berkeleybop.org/editor/graph/gomodel:595a9ee700000584 | Development |