Difference between revisions of "New Model Implementation Checklist"

From WormBaseWiki
Jump to navigationJump to search
(Created page with "'''Files Needed for Implementing New GO Annotation Model''' *Updated ?GO_code file - file made, not yet checked in ACeDB **We needed seven new GO codes to incorporate PAINT a...")
 
Line 3: Line 3:
 
*Updated ?GO_code file - file made, not yet checked in ACeDB
 
*Updated ?GO_code file - file made, not yet checked in ACeDB
 
**We needed seven new GO codes to incorporate PAINT and other external annotations.
 
**We needed seven new GO codes to incorporate PAINT and other external annotations.
 +
 +
*New ?Database objects
 +
**Need a Database object for Gene Ontology Consortium for GO_REFs
 +
 +
*New ?Species objects
 +
**May need new ?Species objects for dual-taxon annotations (e.g., GO:0050829, defense response to Gram negative bacterium)
 +
**Need to check this column in the GAF from GOA and check with Kevin

Revision as of 17:27, 22 January 2014

Files Needed for Implementing New GO Annotation Model

  • Updated ?GO_code file - file made, not yet checked in ACeDB
    • We needed seven new GO codes to incorporate PAINT and other external annotations.
  • New ?Database objects
    • Need a Database object for Gene Ontology Consortium for GO_REFs
  • New ?Species objects
    • May need new ?Species objects for dual-taxon annotations (e.g., GO:0050829, defense response to Gram negative bacterium)
    • Need to check this column in the GAF from GOA and check with Kevin