ModENCODE
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Jump to navigationJump to searchThis is a summary of what we need to get out of modENCODE
5 main areas
The Transcriptome
Chromatin Function
Histone Variants
Regulatory Elements
The 3' UTRome
Datasets available from modmine:
title | description | DCCid | design | experimentDate | publicReleaseDate | embargoDate | |
3' UTR 454 sequencing pilot - alignments | The 3' untranslated region (3'UTR) constitutes a major site of post-transcriptional regulation of gene expression. Sequence elements in the 3'UTR interact with trans-acting regulators such as microRNAs that affect translation and stability. The overall aim is to use a 3'RACE cloning-sequencing stragety to identify the 3'UTRs of C. elegans transcripts and explore their heterogeneity in different developmental stages and tissues. | 992 | transcript_identification_design | Thu Nov 12 00:00:00 GMT 2009 | Thu Nov 12 00:00:00 GMT 2009 | Tue Aug 03 01:00:00 BST 2010 |
We Need to generate an ?Analysis object for each experiment: