Difference between revisions of "Mapping the GAF to GO OA tables"

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Line 9: Line 9:
 
! GAF Column
 
! GAF Column
 
! Value for OA Table
 
! Value for OA Table
 +
! Example Value
 
! New OA Table
 
! New OA Table
 
|-  
 
|-  
 
| gop_paper
 
| gop_paper
 
| Column 6 DB:Reference
 
| Column 6 DB:Reference
| Value after 'WB_ref:' prefix, e.g. WBPaper00005654
+
| Value after 'WB_ref:' prefix
 +
| WBPaper00005654
 
| no
 
| no
 
|-
 
|-
 
| gop_wbgene
 
| gop_wbgene
 
| Column 2: DB Object ID
 
| Column 2: DB Object ID
| Exact string in Column 2; e.g. WBGene00000829
+
| Exact string in Column 2
 +
| WBGene00000829
 +
| no
 
|-
 
|-
 
|}
 
|}

Revision as of 21:11, 3 November 2014

Mapping the Phenotype2GO GAF to GO OA Tables

Back to Gene Ontology


OA Table GAF Column Value for OA Table Example Value New OA Table
gop_paper Column 6 DB:Reference Value after 'WB_ref:' prefix WBPaper00005654 no
gop_wbgene Column 2: DB Object ID Exact string in Column 2 WBGene00000829 no