Difference between revisions of "Mac OSX(Leopard)"

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*[http://ant.apache.org/ Apache Ant] v.1.7.0
 
*[http://ant.apache.org/ Apache Ant] v.1.7.0
 
*[http://www.phenote.org/ Phenote+] v.1.5+  
 
*[http://www.phenote.org/ Phenote+] v.1.5+  
 +
 +
  
 
Phenote is stored in a [http://subversion.tigris.org/ ''Subversion (SVN)''] system ([http://en.wikipedia.org/wiki/Subversion_%28software%29  an alternative] to the CVS version control system we've been using to maintain the latest Phenotype Ontology). And can be downloaded from the [http://subversion.tigris.org/project_packages.html SVN project package page].
 
Phenote is stored in a [http://subversion.tigris.org/ ''Subversion (SVN)''] system ([http://en.wikipedia.org/wiki/Subversion_%28software%29  an alternative] to the CVS version control system we've been using to maintain the latest Phenotype Ontology). And can be downloaded from the [http://subversion.tigris.org/project_packages.html SVN project package page].
  
Apache Ant is a [http://en.wikipedia.org/wiki/Apache_Ant Java based software building tool] and can be downloaded from the the [http://ant.apache.org/bindownload.cgi Binary Distributions page].
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Apache Ant is a [http://en.wikipedia.org/wiki/Apache_Ant Java based software building tool] and can be downloaded from the the [http://ant.apache.org/bindownload.cgi Apache Binary Distributions page].
 
 
  
  
Download phenote+ (called '''phenote2''') from the command line.
+
Download phenote+ source code (called '''phenote2''') from the command line. These instructions are found on the bottom of the [http://www.phenote.org/developer-docs/getting-source-code-in-eclipse.shtml Getting and Running the Source Code]page of the Phenote site.  
  <code>$ svn co https://obo.svn.sourceforge.net/svnroot/obo/phenote/trunk </code>
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  $ svn co https://obo.svn.sourceforge.net/svnroot/obo/phenote2/trunk
  
To launch Phenote+ from the command line:  
+
To update the Phenote+ source code, which you will need to do every so often:  
  <code>pwd to phenote2
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  cd to phenote2
  $ svn update
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  $ svn up
 
  $ ant build-all
 
  $ ant build-all
  $ ./phenote2 -c worm.cfg</code>
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  $ ./phenote2 -c worm.cfg
  
 +
To launch Phenote+ with out updating the source code;
 +
cd to phenote2
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$ ./phenote2 -c worm.cfg
  
 
[http://www.wormbase.org/wiki/index.php/Installing_Phenote ''back'']
 
[http://www.wormbase.org/wiki/index.php/Installing_Phenote ''back'']
  
 
--[[User:Kyook|kjy]] 15:55, 12 March 2008 (EDT)
 
--[[User:Kyook|kjy]] 15:55, 12 March 2008 (EDT)

Revision as of 18:57, 13 March 2008

Required Software


Phenote is stored in a Subversion (SVN) system (an alternative to the CVS version control system we've been using to maintain the latest Phenotype Ontology). And can be downloaded from the SVN project package page.

Apache Ant is a Java based software building tool and can be downloaded from the the Apache Binary Distributions page.


Download phenote+ source code (called phenote2) from the command line. These instructions are found on the bottom of the Getting and Running the Source Codepage of the Phenote site.

$ svn co https://obo.svn.sourceforge.net/svnroot/obo/phenote2/trunk

To update the Phenote+ source code, which you will need to do every so often:

cd to phenote2
$ svn up
$ ant build-all
$ ./phenote2 -c worm.cfg

To launch Phenote+ with out updating the source code;

cd to phenote2
$ ./phenote2 -c worm.cfg

back

--kjy 15:55, 12 March 2008 (EDT)