Difference between revisions of "LEGO Curation"

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= LEGO Beyond Basics =
 
= LEGO Beyond Basics =
*Some biological processes ''regulate'' other biological processes
+
*Some biological processes and molecular functions ''regulate'' other biological processes
**The regulation may be ''positive'' or ''negative''
+
**The regulation may be ''positive'' or ''negative'' and may be 'direct' or 'indirect'
*Some biological processes are ''causally upstream of'' other biological processes
+
*Some biological processes and molecular functions are ''causally upstream of'' other biological processes
 +
*Sometimes you don't necessarily know how two things are related - 'causally upstream of or within'

Revision as of 15:33, 23 January 2017

Agenda

Logins

  • Everyone set up okay?

LEGO Principles

  • Pieces of biological information are connected using a controlled vocabulary of relations
  • Assertions made using these relations are supported with evidence statements, i.e. ECO codes, references

LEGO at its Most Basic

  • Molecular functions are enabled_by genes/gene products
  • Molecular functions may be part_of larger biological processes
  • Molecular functions occur_in some location
    • Subcellular locations are part_of some larger anatomical structure

LEGO Beyond Basics

  • Some biological processes and molecular functions regulate other biological processes
    • The regulation may be positive or negative and may be 'direct' or 'indirect'
  • Some biological processes and molecular functions are causally upstream of other biological processes
  • Sometimes you don't necessarily know how two things are related - 'causally upstream of or within'