Difference between revisions of "Issues-7/23/2013"
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** continuous integration - tests run whenever we push to staging | ** continuous integration - tests run whenever we push to staging | ||
** need to test api tests | ** need to test api tests | ||
− | ** add emails | + | ** add emails - yes |
Write tests! | Write tests! | ||
Line 25: | Line 25: | ||
[https://github.com/WormBase/website/issues/1529 1529] | [https://github.com/WormBase/website/issues/1529 1529] | ||
− | |||
− | |||
* Bug report: missing bp? [https://github.com/WormBase/website/issues/1517 1517] [https://github.com/WormBase/website/issues/1518 1518] | * Bug report: missing bp? [https://github.com/WormBase/website/issues/1517 1517] [https://github.com/WormBase/website/issues/1518 1518] | ||
+ | ** will look at this after testing | ||
For 239: | For 239: | ||
* Test GFF3 and update species still using Bio::DB::GFF to Bio::DB::SeqFeature::Store [https://github.com/WormBase/website/issues/910 910] | * Test GFF3 and update species still using Bio::DB::GFF to Bio::DB::SeqFeature::Store [https://github.com/WormBase/website/issues/910 910] | ||
+ | * Standardize GBrowse config [https://github.com/WormBase/website/issues/909 909] | ||
+ | ** is there still work for this? - FOR 239 | ||
== JD: July Issues == | == JD: July Issues == | ||
Line 42: | Line 43: | ||
* Lineage browsing [https://github.com/WormBase/website/issues/741 741] - July 25 | * Lineage browsing [https://github.com/WormBase/website/issues/741 741] - July 25 | ||
** http://wiki.wormbase.org/index.php/Creating_a_tool | ** http://wiki.wormbase.org/index.php/Creating_a_tool | ||
+ | |||
+ | Cytoscape | ||
+ | * upgrade to js version | ||
= Triage new issues = | = Triage new issues = | ||
− | * Download widget URLs wrong [https://github.com/WormBase/website/issues/1586 1586] | + | * Download widget URLs wrong [https://github.com/WormBase/website/issues/1586 1586] - JB |
− | * Transgene table reporter column wrong [https://github.com/WormBase/website/issues/1585 1585] | + | * Transgene table reporter column wrong [https://github.com/WormBase/website/issues/1585 1585] - JB |
− | * 500 server error dl motifs [https://github.com/WormBase/website/issues/1583 1583] | + | * 500 server error dl motifs [https://github.com/WormBase/website/issues/1583 1583] - JD |
− | * Disease page - genes_by_biology missing [https://github.com/WormBase/website/issues/1472 1472] | + | * Disease page - genes_by_biology missing [https://github.com/WormBase/website/issues/1472 1472] - JD |
− | * wrong paper associations [https://github.com/WormBase/website/issues/1049 1049] | + | * wrong paper associations [https://github.com/WormBase/website/issues/1049 1049] -AC |
− | * save table bug [https://github.com/WormBase/website/issues/1484 1484] | + | * save table bug [https://github.com/WormBase/website/issues/1484 1484] - JB |
− | * Bristol hard-coded [https://github.com/WormBase/website/issues/1308 1308] | + | * Bristol hard-coded [https://github.com/WormBase/website/issues/1308 1308] - AC |
− | * 500 error widget - molecular details [https://github.com/WormBase/website/issues/1272 1272] | + | * 500 error widget - molecular details [https://github.com/WormBase/website/issues/1272 1272] - JD |
Not urgent (but should be done before WS239): | Not urgent (but should be done before WS239): | ||
− | * Blast - e value sorting [https://github.com/WormBase/website/issues/1588 1588] | + | * Blast - e value sorting [https://github.com/WormBase/website/issues/1588 1588] - JB |
− | * Consecutive questions help tab [https://github.com/WormBase/website/issues/1582 1582] | + | * Consecutive questions help tab [https://github.com/WormBase/website/issues/1582 1582] - AC |
− | * Feature request: Features connected to Transcripts [https://github.com/WormBase/website/issues/1567 1567] | + | * Feature request: Features connected to Transcripts [https://github.com/WormBase/website/issues/1567 1567] - JD |
− | * New table in associations widget - anatomy page [https://github.com/WormBase/website/issues/1549 1549] | + | * New table in associations widget - anatomy page [https://github.com/WormBase/website/issues/1549 1549] - AC |
− | * start not found/end not found for CDSes [https://github.com/WormBase/website/issues/1506 1506] | + | * start not found/end not found for CDSes [https://github.com/WormBase/website/issues/1506 1506] - AC |
− |
Latest revision as of 18:10, 23 July 2013
All meetings: WebDev Issues Meetings
Tuesday July 16th, 10:30am 5th floor kitchen
Contents
Progress on tasks to resolve before WS239
JB: Test suite expansion
- GBrowse tests
- goes through config - dl image for each track/species
- need to benchmark - could be slow
- Jenkins
- continuous integration - tests run whenever we push to staging
- need to test api tests
- add emails - yes
Write tests! Unit Testing
JB: Outstanding GBrowse Issues
- 4 are 'Under testing'
1356 1410 1503 1529
For 239:
- Test GFF3 and update species still using Bio::DB::GFF to Bio::DB::SeqFeature::Store 910
- Standardize GBrowse config 909
- is there still work for this? - FOR 239
JD: July Issues
For review:
In progress:
- Lineage browsing 741 - July 25
Cytoscape
- upgrade to js version
Triage new issues
- Download widget URLs wrong 1586 - JB
- Transgene table reporter column wrong 1585 - JB
- 500 server error dl motifs 1583 - JD
- Disease page - genes_by_biology missing 1472 - JD
- wrong paper associations 1049 -AC
- save table bug 1484 - JB
- Bristol hard-coded 1308 - AC
- 500 error widget - molecular details 1272 - JD
Not urgent (but should be done before WS239):