How are the repeats determined?
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Repeats are determined in several ways.
- 1) [RepeatMasker]
There are RepeatMasker libraries available for C.elegans andC.briggsae are available from the [Sanger Institute pages]. These pages also have some description of the motifs identified.
- 2) [Tandem Repeat Finder.] by G. Benson
- 3) [dust]a low-complexity filter for nucleotide sequences