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Meeting minutes, Gene Page review:
-- Keep WormBase ID -- From ce 1 and 2 -- move to history? references? -- Provisional description -- legacy -- Floating Box, how to link to protein info? -- Action Items: ce 1 and 2 -> Make sure citations are expanded. History for now. Kimberly and Ranjana 2 look into proper placement of provisional description. Make Sequence Widget appear on clicking sequence link in floating box.
-- explicitly note a genomic position -- call genomic view? -- Action Item: Name with something more descriptive
-- actually curation history; unclear what it is. -- rename as database history? check presentation options on sidebar listing -- call Database history? -- Try first -- selective viewing; details to curators only?
-- Tissues with color has expression (color standard representation in WormAtlas). -- Descriptive statements needed - TH -- List anatomy terms associated with the expression; -- Action Items: Chris to provide legend for color/tissue correspondence. Work on "conservative" and "liberal" info representation Move chronogram further down. Provide tooltip for expression cluster link; Wen to provide description. Microarray results -> Microarray Spot ID(?) Move topology Map right below Expression cluster via Anatomy_function -> Experiments in table column headers General cleanup
- Gene Ontology
-- Simplify info representation; focus on term less the method -- Make into sortable table? -- Action Items: Look into GO details page for ideas for rendering table; See SGDs
-- Pretty straight forward -- Action Items: Move strains to the top.
-- Need feedback from Hinxton (left). -- Protein domains - used to be part of function; should it be there? -- Action Item: Move Protein Domains to the bottom.
-- Action Items: Put data in table Evaluate other tools for graphic viewing (long term)
-- Action Item: Collapse not observed: especially RNAi; emphasize NOT in label; use term "perturbations" rather than "mutation" for RNAi move to WB2 data tables; move Phenotype column in RNAi to first
-- Sage & Matching cDNAs: toggle list? -- Action Item: clean up empty fields Relabel Microarray probes -> Microarray oligo sets Remove "Found" in data lines (through out site). Move cDNA and Antibody up. Group primer pairs and oligos
-- Working to separate via categories -- Export citations? -- Not yet
-- Need comments from Hinxton -- Action Items: Rearrange table to reflect Central Dogma Caltech to make other sequences descriptions