Difference between revisions of "GSA-GO Linking Summary Tables"
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{| {{table border ="1"}} | {| {{table border ="1"}} | ||
| align="center" style="background:#f0f0f0;"|'''GSA Paper ID''' | | align="center" style="background:#f0f0f0;"|'''GSA Paper ID''' | ||
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{| {{table border ="1"}} | {| {{table border ="1"}} | ||
| align="center" style="background:#f0f0f0;"|'''GSA Paper ID''' | | align="center" style="background:#f0f0f0;"|'''GSA Paper ID''' | ||
Revision as of 17:46, 9 September 2011
110338
| GSA Paper ID | Linked Term in Abstract | Linked Term in GO | Instance in Abstract | Synonym match, if applicable | Ontology Aspect (P, F, C) | Larger Phrase in Abstract, if applicable | Best Possible GO Link, if different | Assessment of Existing Link (Y, N, G(ray area)) | Comments | Other Actions | |
| 110338 | male meiosis | GO:0007140 male meiosis | 1 | P | Y(kv) | missed GO:0007143 female meiosis (kv) | |||||
| 110338 | chromosome segregation | GO:0007059 chromosome segregation | 1 | P | sex chromosome segregation | GO:0016321 female meiosis chromosome segregation, GO:0007060 male meiosis chromosome segregation | Y(kv) | Can we link out to more than one term? (kv) | Ontology development? (kv) | ||
| 110338 | prophase | GO:0051324 prophase | 1 | P | meiotic prophase | GO:0007128 meiotic prophase I, GO:0007136 meiotic prophase II | Y(kv) | Not clear which meiotic prophase the authors mean and there is no general term for meiotic prophase. (kv) | Add meiotic prophase to GO? (kv) | ||
| 110338 | apoptosis | GO:0006915 apoptosis | 1 | P | germ-line apoptosis | Y(kv) | Ontology development? - germline vs somatic, if mechanism is different (kv) | ||||
| 110338 | signaling | GO:0023052 signaling | 1 | P | checkpoint signaling | GO:0072411 signal transduction involved in meiotic cell cycle checkpoint | Y(kv) | Maybe even GO:0072461 response to meiotic recombination checkpoint signal | |||
| 110338 | oogenesis | GO:0048477 oogenesis | 1 | P | oogenesis | Y(kv) | |||||
| 110338 | spermatogenesis | GO:0007283 spermatogenesis | 1 | P | spermatogenesis | Y(kv) | |||||
| 110338 | oogenesis | GO:0048477 oogenesis | 2 | P | oogenesis | Y(kv) | |||||
| 110338 | X chromosome | GO:0000805 X chromosome | 1 | P | X chromosome | Y(kv) | |||||
| 110338 | X chromosome | GO:0000805 X chromosome | 2 | P | X chromosome | Y(kv) | |||||
| 110338 | synapsis | GO:0007129 synapsis | 1 | P | self-synapsis | Y(kv) | Broaden GO definition? (kv) | ||||
| 110338 | apoptosis | GO:0006915 apoptosis | 1 | P | apoptosis | Y(kv) | |||||
| 110338 | chromatin | GO:0000785 chromatin | 1 | P | chromatin | GO:0000790 nuclear chromatin | Y(kv) | ||||
| 110338 | gene expression | GO:0010467 gene expression | 1 | P | X-linked gene expression | GO:0009299 mRNA transcription | Y(kv) | ||||
| 110338 | chromatin | GO:0000785 chromatin | 2 | P | chromatin | GO:0000790 nuclear chromatin | Y(kv) | ||||
| 110338 | signaling | GO:0023052 signaling | 2 | P | checkpoint signaling | GO:0072411 signal transduction involved in meiotic cell cycle checkpoint | Y(kv) | Maybe even GO:0072461 response to meiotic recombination checkpoint signal |
123323
| GSA Paper ID | Linked Term in Abstract | Linked Term in GO | Instance in Abstract | Synonym match, if applicable | Ontology Aspect (P, F, C) | Larger Phrase in Abstract, if applicable | Best Possible GO Link, if different | Assessment of Existing Link (Y, N, G(ray area)) | Comments | Other Actions |
| 123323 | diapause | GO:0030431 sleep | 1 | related synonym | P | entry in the facultative dauer diapause stage | GO:0043053 duaer entry | N(kv) |
