Difference between revisions of "GPAD to .ace file"
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#We get back from UniProt ''all'' C. elegans annotations, regardless of annotation source (e.g., WormBase, UniProt, IntAct, etc). | #We get back from UniProt ''all'' C. elegans annotations, regardless of annotation source (e.g., WormBase, UniProt, IntAct, etc). | ||
#We get back all data in the with/from column (e.g., variations, RNAi experiments) | #We get back all data in the with/from column (e.g., variations, RNAi experiments) | ||
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+ | A table mapping gpad columns to .ace: |
Revision as of 21:16, 7 February 2013
This page outlines how we'll go forward with converting the gpad file we get back from UniProt into a .ace file for upload to citace.
The final file specifications for the GPAD file are available here:
http://wiki.geneontology.org/index.php/Final_GPAD_and_GPI_file_format
Things to confirm:
- We get back from UniProt all C. elegans annotations, regardless of annotation source (e.g., WormBase, UniProt, IntAct, etc).
- We get back all data in the with/from column (e.g., variations, RNAi experiments)
A table mapping gpad columns to .ace: