Difference between revisions of "GFF Release Data and Changes"

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(Added overview of which datasets contain bioproject IDs as part of their landmark.)
(Format comparison: WS237 vs WS238.)
Line 7: Line 7:
 
{| class="wikitable"
 
{| class="wikitable"
 
|-
 
|-
−
! Table !! Data Format !! Landmark Includes Bioproject ID !!
+
! Table !! Data Format !! Format Changed from WS237 to WS238? !! Landmark Includes Bioproject ID? !!
 
|-
 
|-
−
| a_suum_PRJNA62057_WS238 || GFF3 || no
+
| a_suum_PRJNA62057_WS238 || GFF3 || no || no
 
|-
 
|-
−
| a_suum_PRJNA80881_WS238 || GFF3 || yes (e.g., As_PRJNA80881_Scaffold122)
+
| a_suum_PRJNA80881_WS238 || GFF3 || no || yes (e.g., As_PRJNA80881_Scaffold122)
 
|-
 
|-
−
| b_malayi_PRJNA10729_WS238 || GFF2 || ?
+
| b_malayi_PRJNA10729_WS238 || GFF2 || no || ?
 
|-
 
|-
−
| b_xylophilus_PRJEA64437_WS238 || GFF3 || no
+
| b_xylophilus_PRJEA64437_WS238 || GFF3 || no || no
 
|-
 
|-
−
| c_angaria_PRJNA51225_WS238 || GFF3 || no
+
| c_angaria_PRJNA51225_WS238 || GFF3 || no || no
 
|-
 
|-
−
| c_brenneri_PRJNA20035_WS238 || GFF2 || ?
+
| c_brenneri_PRJNA20035_WS238 || GFF2 || no || ?
 
|-
 
|-
−
| c_briggsae_PRJNA10731_WS238 || GFF2 || ?
+
| c_briggsae_PRJNA10731_WS238 || GFF2 || no || ?
 
|-
 
|-
−
| c_elegans_PRJNA13758_WS238 || GFF2 || ?
+
| c_elegans_PRJNA13758_WS238 || GFF2 || no || ?
 
|-
 
|-
−
| c_japonica_PRJNA12591_WS238 || GFF2 || ?
+
| c_japonica_PRJNA12591_WS238 || GFF2 || no || ?
 
|-
 
|-
−
| c_remanei_PRJNA53967_WS238 || GFF2 || ?
+
| c_remanei_PRJNA53967_WS238 || GFF2 || no || ?
 
|-
 
|-
−
| c_sp11_PRJNA53597_WS238 || GFF3 || no
+
| c_sp11_PRJNA53597_WS238 || GFF3 || no || no
 
|-
 
|-
−
| c_sp5_PRJNA194557_WS238 || GFF3 || no
+
| c_sp5_PRJNA194557_WS238 || GFF3 || no || no
 
|-
 
|-
−
| h_bacteriophora_PRJNA13977_WS238 || GFF3 || no
+
| h_bacteriophora_PRJNA13977_WS238 || GFF3 || no || no
 
|-
 
|-
−
| h_contortus_PRJEB506_WS238 || GFF3 || no
+
| h_contortus_PRJEB506_WS238 || GFF3 || no || no
 
|-
 
|-
−
| l_loa_PRJNA60051_WS238 || GFF3 || no
+
| l_loa_PRJNA60051_WS238 || GFF3 || no || no
 
|-
 
|-
−
| m_hapla_PRJNA29083_WS238 || GFF3 || no
+
| m_hapla_PRJNA29083_WS238 || GFF3 || no || no
 
|-
 
|-
−
| m_incognita_PRJEA28837_WS238 || GFF3 || no
+
| m_incognita_PRJEA28837_WS238 || GFF3 || no || no
 
|-
 
|-
−
| p_pacificus_PRJNA12644_WS238 || GFF2 || ?
+
| p_pacificus_PRJNA12644_WS238 || GFF2 || no || ?
 
|-
 
|-
−
| s_ratti_PRJEA62033_WS238 || GFF3 || no
+
| s_ratti_PRJEA62033_WS238 || GFF3 || no || no
 
|-
 
|-
−
| t_spiralis_PRJNA12603_WS238 || GFF3 || no
+
| t_spiralis_PRJNA12603_WS238 || GFF3 || no || no
 
|}
 
|}

Revision as of 15:24, 29 May 2013

WS238

Table name format: genus-initial_species_bioproject-id_release

Example: a_suum_PRJNA62057_WS238

Table Data Format Format Changed from WS237 to WS238? Landmark Includes Bioproject ID?
a_suum_PRJNA62057_WS238 GFF3 no no
a_suum_PRJNA80881_WS238 GFF3 no yes (e.g., As_PRJNA80881_Scaffold122)
b_malayi_PRJNA10729_WS238 GFF2 no ?
b_xylophilus_PRJEA64437_WS238 GFF3 no no
c_angaria_PRJNA51225_WS238 GFF3 no no
c_brenneri_PRJNA20035_WS238 GFF2 no ?
c_briggsae_PRJNA10731_WS238 GFF2 no ?
c_elegans_PRJNA13758_WS238 GFF2 no ?
c_japonica_PRJNA12591_WS238 GFF2 no ?
c_remanei_PRJNA53967_WS238 GFF2 no ?
c_sp11_PRJNA53597_WS238 GFF3 no no
c_sp5_PRJNA194557_WS238 GFF3 no no
h_bacteriophora_PRJNA13977_WS238 GFF3 no no
h_contortus_PRJEB506_WS238 GFF3 no no
l_loa_PRJNA60051_WS238 GFF3 no no
m_hapla_PRJNA29083_WS238 GFF3 no no
m_incognita_PRJEA28837_WS238 GFF3 no no
p_pacificus_PRJNA12644_WS238 GFF2 no ?
s_ratti_PRJEA62033_WS238 GFF3 no no
t_spiralis_PRJNA12603_WS238 GFF3 no no
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