Difference between revisions of "GFF Release Data and Changes"
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Jump to navigationJump to search (Started a summary page for tracking data format changes.) |
(Added overview of which datasets contain bioproject IDs as part of their landmark.) |
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− | WS238 | + | = WS238 = |
− | Table name format: | + | Table name format: ''genus-initial''_''species''_''bioproject-id''_''release'' |
+ | |||
+ | Example: a_suum_PRJNA62057_WS238 | ||
{| class="wikitable" | {| class="wikitable" | ||
|- | |- | ||
− | ! Table !! Data Format !! Landmark | + | ! Table !! Data Format !! Landmark Includes Bioproject ID !! |
|- | |- | ||
− | | a_suum_PRJNA62057_WS238 || GFF3 || | + | | a_suum_PRJNA62057_WS238 || GFF3 || no |
|- | |- | ||
− | | a_suum_PRJNA80881_WS238 || GFF3 || | + | | a_suum_PRJNA80881_WS238 || GFF3 || yes (e.g., As_PRJNA80881_Scaffold122) |
|- | |- | ||
− | | b_malayi_PRJNA10729_WS238 || GFF2 || | + | | b_malayi_PRJNA10729_WS238 || GFF2 || ? |
|- | |- | ||
− | | b_xylophilus_PRJEA64437_WS238 || GFF3 || | + | | b_xylophilus_PRJEA64437_WS238 || GFF3 || no |
|- | |- | ||
− | | c_angaria_PRJNA51225_WS238 || GFF3 || | + | | c_angaria_PRJNA51225_WS238 || GFF3 || no |
|- | |- | ||
− | | c_brenneri_PRJNA20035_WS238 || GFF2 || | + | | c_brenneri_PRJNA20035_WS238 || GFF2 || ? |
|- | |- | ||
− | | c_briggsae_PRJNA10731_WS238 || GFF2 || | + | | c_briggsae_PRJNA10731_WS238 || GFF2 || ? |
|- | |- | ||
− | | c_elegans_PRJNA13758_WS238 || GFF2 || | + | | c_elegans_PRJNA13758_WS238 || GFF2 || ? |
|- | |- | ||
− | | c_japonica_PRJNA12591_WS238 || GFF2 || | + | | c_japonica_PRJNA12591_WS238 || GFF2 || ? |
|- | |- | ||
− | | c_remanei_PRJNA53967_WS238 || GFF2 || | + | | c_remanei_PRJNA53967_WS238 || GFF2 || ? |
|- | |- | ||
− | | c_sp11_PRJNA53597_WS238 || GFF3 || | + | | c_sp11_PRJNA53597_WS238 || GFF3 || no |
|- | |- | ||
− | | c_sp5_PRJNA194557_WS238 || GFF3 || | + | | c_sp5_PRJNA194557_WS238 || GFF3 || no |
|- | |- | ||
− | | h_bacteriophora_PRJNA13977_WS238 || GFF3 || | + | | h_bacteriophora_PRJNA13977_WS238 || GFF3 || no |
|- | |- | ||
− | | h_contortus_PRJEB506_WS238 || GFF3 || | + | | h_contortus_PRJEB506_WS238 || GFF3 || no |
|- | |- | ||
− | | l_loa_PRJNA60051_WS238 || GFF3 || | + | | l_loa_PRJNA60051_WS238 || GFF3 || no |
|- | |- | ||
− | | m_hapla_PRJNA29083_WS238 || GFF3 || | + | | m_hapla_PRJNA29083_WS238 || GFF3 || no |
|- | |- | ||
− | | m_incognita_PRJEA28837_WS238 || GFF3 || | + | | m_incognita_PRJEA28837_WS238 || GFF3 || no |
|- | |- | ||
− | | p_pacificus_PRJNA12644_WS238 || GFF2 || | + | | p_pacificus_PRJNA12644_WS238 || GFF2 || ? |
|- | |- | ||
− | | s_ratti_PRJEA62033_WS238 || GFF3 || | + | | s_ratti_PRJEA62033_WS238 || GFF3 || no |
|- | |- | ||
− | | t_spiralis_PRJNA12603_WS238 || GFF3 || | + | | t_spiralis_PRJNA12603_WS238 || GFF3 || no |
|} | |} |
Revision as of 14:15, 29 May 2013
WS238
Table name format: genus-initial_species_bioproject-id_release
Example: a_suum_PRJNA62057_WS238
Table | Data Format | Landmark Includes Bioproject ID | |
---|---|---|---|
a_suum_PRJNA62057_WS238 | GFF3 | no | |
a_suum_PRJNA80881_WS238 | GFF3 | yes (e.g., As_PRJNA80881_Scaffold122) | |
b_malayi_PRJNA10729_WS238 | GFF2 | ? | |
b_xylophilus_PRJEA64437_WS238 | GFF3 | no | |
c_angaria_PRJNA51225_WS238 | GFF3 | no | |
c_brenneri_PRJNA20035_WS238 | GFF2 | ? | |
c_briggsae_PRJNA10731_WS238 | GFF2 | ? | |
c_elegans_PRJNA13758_WS238 | GFF2 | ? | |
c_japonica_PRJNA12591_WS238 | GFF2 | ? | |
c_remanei_PRJNA53967_WS238 | GFF2 | ? | |
c_sp11_PRJNA53597_WS238 | GFF3 | no | |
c_sp5_PRJNA194557_WS238 | GFF3 | no | |
h_bacteriophora_PRJNA13977_WS238 | GFF3 | no | |
h_contortus_PRJEB506_WS238 | GFF3 | no | |
l_loa_PRJNA60051_WS238 | GFF3 | no | |
m_hapla_PRJNA29083_WS238 | GFF3 | no | |
m_incognita_PRJEA28837_WS238 | GFF3 | no | |
p_pacificus_PRJNA12644_WS238 | GFF2 | ? | |
s_ratti_PRJEA62033_WS238 | GFF3 | no | |
t_spiralis_PRJNA12603_WS238 | GFF3 | no |