Difference between revisions of "FlyBase"
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| − | + | ===GO Curation Pipeline at FlyBase=== | |
| − | + | ==Textpresso for Cellular Component Curation for FlyBase== | |
Basic outline: use FlyBase gene association file to sort search results based upon presence/absence in GAF and presence/absence of CC annotation | Basic outline: use FlyBase gene association file to sort search results based upon presence/absence in GAF and presence/absence of CC annotation | ||
| Line 8: | Line 8: | ||
| − | + | ==History== | |
Incoming papers are flagged as having ''new'' or ''comprehensive'' GO data. It's, therefore, not easy to identify | Incoming papers are flagged as having ''new'' or ''comprehensive'' GO data. It's, therefore, not easy to identify | ||
Latest revision as of 18:02, 21 July 2011
GO Curation Pipeline at FlyBase
Textpresso for Cellular Component Curation for FlyBase
Basic outline: use FlyBase gene association file to sort search results based upon presence/absence in GAF and presence/absence of CC annotation
May also search using a priority gene list
History
Incoming papers are flagged as having new or comprehensive GO data. It's, therefore, not easy to identify
previously curated papers that would be classed as such for an SVM.
11/20/09 ACTION ITEM: Remove old Curator specific CCC categories from FlyBase implementation. In their place, add new CCC cateogries: CCC assay terms, CCC cellular components, CCC verbs. Also add tables and figures category.
11/20/09 ACTION ITEM: Add Molecular Function binding/physical interaction categories to FlyBase implementation.
Back to Gene Ontology
